RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 TDRD12Q587J7 1177 aaKnown RBP13.8□□□□□ -0.2
RPAIN-207ENST00000570883 PLEKHA7Q6IQ23 1121 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 PPP1R2P3Q6NXS1 205 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 TFAP2DQ7Z6R9 452 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 C11orf74Q86VG3 221 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 TMPRSS6Q8IU80 811 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 OR2T3Q8NH03 318 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 RPL10LQ96L21 214 aaKnown RBP13.8□□□□□ -0.2
RPAIN-207ENST00000570883 FEM1AQ9BSK4 669 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 TRIM7Q9C029 511 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 ARRDC1-AS1Q9H2J1 176 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 PRSS16Q9NQE7 514 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 USP36Q9P275 1121 aaKnown RBP13.8□□□□□ -0.2
RPAIN-207ENST00000570883 SLCO3A1Q9UIG8 710 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 CYP8B1Q9UNU6 501 aa13.8□□□□□ -0.2
RPAIN-207ENST00000570883 LUC7L2Q9Y383 392 aaKnown RBP13.8□□□□□ -0.2
RPAIN-207ENST00000570883 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 CACNA1AO00555 2505 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-207ENST00000570883 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 TTC34A8MYJ7 566 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 FAM72CH0Y354 149 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 SRGAP2O75044 1071 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 RTN2O75298 545 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 RHOBTB1O94844 696 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 MOCS3O95396 460 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 SERPING1P05155 500 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 MPLP40238 635 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 PTGER3P43115 390 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 ECT2LQ008S8 904 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 NRG1Q02297 640 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-207ENST00000570883 SCAPQ12770 1279 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 ZNF177Q13360 481 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-207ENST00000570883 ARID5BQ14865 1188 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 HNRNPA1L2Q32P51 320 aaKnown RBP13.79□□□□□ -0.2
RPAIN-207ENST00000570883 PLA2G2CQ5R387 149 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 ACBD5Q5T8D3 534 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-207ENST00000570883 FAM72AQ5TYM5 149 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 FAM72DQ6L9T8 149 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
RPAIN-207ENST00000570883 FAM72BQ86X60 149 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 TMEFF1Q8IYR6 380 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 KDM1BQ8NB78 822 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 NTAN1Q96AB6 310 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 PSMB7Q99436 277 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 ISCUQ9H1K1 167 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 SMOC1Q9H4F8 434 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 SEMA4GQ9NTN9 838 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 KNL1Q8NG31 2342 aa13.79□□□□□ -0.2
RPAIN-207ENST00000570883 CNOT1A5YKK6 2376 aaKnown RBP13.79□□□□□ -0.2
RPAIN-207ENST00000570883 PCDH15Q96QU1 1955 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 SPTBN2O15020 2390 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 BCLAF3A2AJT9 711 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ANKRD62A6NC57 917 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ZBTB24O43167 697 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 AP5Z1O43299 807 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 CBFA2T2O43439 604 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ZNF217O75362 1048 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 IGLV3-19P01714 112 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 TPM3P06753 285 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 SRPRAP08240 638 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 HNRNPH3P31942 346 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 TPMTP51580 245 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 OXCT1P55809 520 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ST8SIA6P61647 398 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 BYSLQ13895 437 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 CSRP2Q16527 193 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 C9orf64Q5T6V5 341 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 RNF219Q5W0B1 726 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 SPECC1LQ69YQ0 1117 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 DCUN1D2Q6PH85 259 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 LRRC31Q6UY01 552 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ARMCX6Q7L4S7 300 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 LPCAT2Q7L5N7 544 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 PYROXD2Q8N2H3 581 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ZNF653Q96CK0 615 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 SIPA1Q96FS4 1042 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 OSBPL2Q9H1P3 480 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ARHGAP20Q9P2F6 1191 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 PPARGC1AQ9UBK2 798 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 CNOT8Q9UFF9 292 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 OR12D3Q9UGF7 316 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 VPS28Q9UK41 221 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 USP18Q9UMW8 372 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 NENFQ9UMX5 172 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 BZW2Q9Y6E2 419 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 PLXNA2O75051 1894 aa13.78□□□□□ -0.2
RPAIN-207ENST00000570883 ASCC3Q8N3C0 2202 aaKnown RBP13.78□□□□□ -0.2
RPAIN-207ENST00000570883 A0A087X0T9 212 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 A0A0D9SEW6 157 aa13.77□□□□□ -0.21
RPAIN-207ENST00000570883 TMEM191CA6NGB0 347 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms