RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 MORC3Q14149 939 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 SHBQ15464 509 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 ARHGAP44Q17R89 818 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 PDZD3Q86UT5 571 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 PASD1Q8IV76 773 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 CCAR2Q8N163 923 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 ZNF557Q8N988 423 aaPredicted RBP8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 ZNF606Q8WXB4 792 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 RNF34Q969K3 372 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 LRIG1Q96JA1 1093 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 SERAC1Q96JX3 654 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 FAM204AQ9H8W3 233 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 FTSJ1Q9UET6 329 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 SCML1Q9UN30 329 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 FREM2Q5SZK8 3169 aa8.89□□□□□ -0.99
CTDNEP1-203ENST00000570385 TP53BP1Q12888 1972 aaPredicted RBP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3DA0A087WVF3 549 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3IA0A087WXS9 549 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3EA0A087X179 549 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3KA0A087X1G2 549 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 A0A1B0GTQ1 180 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TARSL2A2RTX5 802 aaKnown RBP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3FA6NER0 549 aaPredicted RBP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 KCNU1A8MYU2 1149 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3LB9A6J9 549 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 RTN2O75298 545 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 DKK1O94907 266 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 ITGAVP06756 1048 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 SRPRAP08240 638 aaKnown RBP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3HP0C7X1 549 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 GOT1P17174 413 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC9A1P19634 815 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 ABCB4P21439 1286 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 C5AR1P21730 350 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 CD38P28907 300 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 RPL34P49207 117 aaKnown RBP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 ADPRHP54922 357 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 BNIP3Q12983 259 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 PAK1Q13153 545 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 NME3Q13232 169 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 PDCLQ13371 301 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 NNTQ13423 1086 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 ACCSLQ4AC99 568 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3GQ6DHY5 549 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3CQ6IPX1 549 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 SND1Q7KZF4 910 aaKnown RBP eCLIP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TMEM110Q86TL2 294 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 TBC1D3Q8IZP1 549 aaPredicted RBP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 DEFB106AQ8N104 65 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 EID2Q8N6I1 236 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 ATP6V0D2Q8N8Y2 350 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 OR52K2Q8NGK3 314 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 OR2T34Q8NGX1 318 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 CRELD1Q96HD1 420 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 BTN2A3PQ96KV6 586 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 DCBLD2Q96PD2 775 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 ELF4Q99607 663 aaPredicted RBP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 IRX2Q9BZI1 471 aaPredicted RBP8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 THAP9Q9H5L6 903 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 CAAP1Q9H8G2 361 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 POPDC2Q9HBU9 364 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 DDIT4Q9NX09 232 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 CNTN6Q9UQ52 1028 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 CA5BQ9Y2D0 317 aa8.88□□□□□ -0.99
CTDNEP1-203ENST00000570385 A0A1W2PR77 199 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 BECN2A8MW95 431 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 ENC1O14682 589 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 MED7O43513 233 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 LDOC1O95751 146 aaPredicted RBP8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 GNA14O95837 355 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 ADH1BP00325 375 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 IGLV3-25P01717 112 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 PNMA6AP0CW24 399 aaPredicted RBP8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 JUPP14923 745 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 DRD3P35462 400 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 NNMTP40261 264 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 PPP1R2P41236 205 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 CDK17Q00537 523 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 SFSWAPQ12872 951 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 CAMK2BQ13554 666 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 BECN1Q14457 450 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 ARID5BQ14865 1188 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 CAMK4Q16566 473 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 OR6B2Q6IFH4 312 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 CXorf57Q6NSI4 855 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 FBXL22Q6P050 247 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 C14orf80Q86SX3 495 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 GALNT15Q8N3T1 639 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 WDTC1Q8N5D0 677 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 SAP25Q8TEE9 199 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 STK32AQ8WU08 396 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 KLK6Q92876 244 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 CNDP2Q96KP4 475 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 PPP1R13BQ96KQ4 1090 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 RPRD1AQ96P16 312 aaPredicted RBP8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 MED15Q96RN5 788 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 CPXM1Q96SM3 734 aa8.87□□□□□ -0.99
CTDNEP1-203ENST00000570385 PRMT1Q99873 361 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms