RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ENPP2Q13822 863 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 AUHQ13825 339 aaKnown RBP14.93□□□□□ -0.02
COMMD4-225ENST00000569245 FSCBQ5H9T9 825 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 RNF43Q68DV7 783 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 KIAA0907Q7Z7F0 614 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-225ENST00000569245 CIR1Q86X95 450 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-225ENST00000569245 CACUL1Q86Y37 369 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 TMPRSS6Q8IU80 811 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 PIGKQ92643 395 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 PRCCQ92733 491 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-225ENST00000569245 SIPA1Q96FS4 1042 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 VCPIP1Q96JH7 1222 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 NPY6RQ99463 290 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 SIK2Q9H0K1 926 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 CD248Q9HCU0 757 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 PIGVQ9NUD9 493 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 KIAA1522Q9P206 1035 aaPredicted RBP14.93□□□□□ -0.02
COMMD4-225ENST00000569245 PAXBP1Q9Y5B6 917 aa14.93□□□□□ -0.02
COMMD4-225ENST00000569245 BCLAF3A2AJT9 711 aaKnown RBP14.92□□□□□ -0.02
COMMD4-225ENST00000569245 RCCD1A6NED2 376 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 USP27XA6NNY8 438 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 BTNL10A8MVZ5 291 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 TMCO5BA8MYB1 307 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 ESPNB1AK53 854 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 PAGE1O75459 146 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 TFE3P19532 575 aaPredicted RBP14.92□□□□□ -0.02
COMMD4-225ENST00000569245 MMP8P22894 467 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 CSKP41240 450 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 ARHGAP25P42331 645 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 KIF5AQ12840 1032 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 PUM1Q14671 1186 aaKnown RBP eCLIP14.92□□□□□ -0.02
COMMD4-225ENST00000569245 PTPRNQ16849 979 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 SLC25A52Q3SY17 297 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 PITRM1Q5JRX3 1037 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 PLA2G2CQ5R387 149 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 TTC39BQ5VTQ0 682 aaPredicted RBP14.92□□□□□ -0.02
COMMD4-225ENST00000569245 RNF219Q5W0B1 726 aaPredicted RBP14.92□□□□□ -0.02
COMMD4-225ENST00000569245 FBXL22Q6P050 247 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 ZNF366Q8N895 744 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 TRIM11Q96F44 468 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 TBCBQ99426 244 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 PRMT1Q99873 361 aaKnown RBP14.92□□□□□ -0.02
COMMD4-225ENST00000569245 C11orf70Q9BRQ4 267 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 PACSIN1Q9BY11 444 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 TSGA10Q9BZW7 698 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 LACRTQ9GZZ8 138 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 MKRN2Q9H000 416 aaKnown RBP14.92□□□□□ -0.02
COMMD4-225ENST00000569245 TKTL2Q9H0I9 626 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 TRMT1Q9NXH9 659 aaKnown RBP14.92□□□□□ -0.02
COMMD4-225ENST00000569245 VANGL2Q9ULK5 521 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 HS3ST4Q9Y661 456 aa14.92□□□□□ -0.02
COMMD4-225ENST00000569245 IGHV1OR15-9A0A0B4J2B8 117 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 GDF9O60383 454 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 ASLP04424 464 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 MYBL1P10243 752 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 FLT3P36888 993 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 GGCXP38435 758 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 PTGER3P43115 390 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 CXCR3P49682 368 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
COMMD4-225ENST00000569245 TCEAL1Q15170 157 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 SPDYCQ5MJ68 293 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 BRMS1LQ5PSV4 323 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 LYSMD4Q5XG99 296 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 TCEAL6Q6IPX3 200 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 MON1BQ7L1V2 547 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 DGLUCYQ7Z3D6 616 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 MCOLN2Q8IZK6 566 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 C17orf53Q8N3J3 647 aaPredicted RBP14.91□□□□□ -0.02
COMMD4-225ENST00000569245 OR2T3Q8NH03 318 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 NETO1Q8TDF5 533 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 TCEAL3Q969E4 200 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 TTC17Q96AE7 1141 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 LMLNQ96KR4 655 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 CFAP57Q96MR6 1250 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 TMEM245Q9H330 911 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 METTL5Q9NRN9 209 aaKnown RBP14.91□□□□□ -0.02
COMMD4-225ENST00000569245 TMEM51Q9NW97 253 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 ADAM22Q9P0K1 906 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 SUN2Q9UH99 717 aa14.91□□□□□ -0.02
COMMD4-225ENST00000569245 MYO18AQ92614 2054 aaKnown RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 A0A0A6YYK5 440 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 A0A0U1RQJ8 604 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 A0A1B0GVM2 712 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 TCAF2A6NFQ2 919 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 KHNYNO15037 678 aaKnown RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 KRT86O43790 486 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 CALB1P05937 261 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 PDGFRAP16234 1089 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 CD6P30203 668 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 NUMBP49757 651 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 OXCT1P55809 520 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ATP11AP98196 1134 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ECT2LQ008S8 904 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 PTP4A2Q12974 167 aa14.9□□□□□ -0.02
COMMD4-225ENST00000569245 ZNF177Q13360 481 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 CAMK2GQ13555 558 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 OTUD1Q5VV17 481 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-225ENST00000569245 LRRC31Q6UY01 552 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms