RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 PUM1Q14671 1186 aaKnown RBP eCLIP17.62■□□□□ 0.414e-8■■□□□ 14.3
KNOP1-205ENST00000568230 CDO1Q16878 200 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 C15orf59Q2T9L4 293 aaPredicted RBP17.62■□□□□ 0.41
KNOP1-205ENST00000568230 ALFQ53S48 1182 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 SFMBT2Q5VUG0 894 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 PEAR1Q5VY43 1037 aaPredicted RBP17.62■□□□□ 0.41
KNOP1-205ENST00000568230 TCEAL6Q6IPX3 200 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 ACAD10Q6JQN1 1059 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 PPP1R2P3Q6NXS1 205 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 DNAJC24Q6P3W2 148 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 ARMCX6Q7L4S7 300 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 CACUL1Q86Y37 369 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 MCOLN2Q8IZK6 566 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 C12orf50Q8NA57 414 aaPredicted RBP17.62■□□□□ 0.41
KNOP1-205ENST00000568230 OR52K2Q8NGK3 314 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 TCEAL3Q969E4 200 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 FEM1AQ9BSK4 669 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 SELENOOQ9BVL4 669 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 CDV3Q9UKY7 258 aaKnown RBP17.62■□□□□ 0.41
KNOP1-205ENST00000568230 OR51B4Q9Y5P0 310 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 NUMA1Q14980 2115 aa17.62■□□□□ 0.41
KNOP1-205ENST00000568230 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.61■□□□□ 0.41
KNOP1-205ENST00000568230 E9PAM4 449 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 OXTRP30559 389 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 HOXD12P35452 270 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 DPP6P42658 865 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 VASPP50552 380 aaPredicted RBP17.61■□□□□ 0.41
KNOP1-205ENST00000568230 HDAC4P56524 1084 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 UBASH3AP57075 661 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 ZBTB16Q05516 673 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 RAB6CQ53S08 254 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 PPP1R15BQ5SWA1 713 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 SH3PXD2AQ5TCZ1 1133 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 RNF219Q5W0B1 726 aaPredicted RBP17.61■□□□□ 0.41
KNOP1-205ENST00000568230 WDR59Q6PJI9 974 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 LRRC31Q6UY01 552 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 ZNF571Q7Z3V5 609 aaPredicted RBP17.61■□□□□ 0.41
KNOP1-205ENST00000568230 SYT12Q8IV01 421 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 SLC41A1Q8IVJ1 513 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 TOE1Q96GM8 510 aaKnown RBP17.61■□□□□ 0.41
KNOP1-205ENST00000568230 VCPIP1Q96JH7 1222 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 PPP1R9BQ96SB3 815 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 NUP58Q9BVL2 599 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 RAB6CQ9H0N0 254 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 RSPH9Q9H1X1 276 aaPredicted RBP17.61■□□□□ 0.41
KNOP1-205ENST00000568230 HAUS4Q9H6D7 363 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 RXFP3Q9NSD7 469 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 WSB2Q9NYS7 404 aaPredicted RBP17.61■□□□□ 0.41
KNOP1-205ENST00000568230 TAS2R14Q9NYV8 317 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 ZNF212Q9UDV6 495 aa17.61■□□□□ 0.41
KNOP1-205ENST00000568230 A0A1W2PQJ5 194 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 TTC34A8MYJ7 566 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 GDF9O60383 454 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 SIN3BO75182 1162 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 ACADMP11310 421 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 TNFAIP3P21580 790 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 GPD1P21695 349 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 ITPKAP23677 461 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 RRM1P23921 792 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 STK19P49842 368 aaPredicted RBP17.6■□□□□ 0.41
KNOP1-205ENST00000568230 ZNF143P52747 638 aaPredicted RBP17.6■□□□□ 0.41
KNOP1-205ENST00000568230 LIMK1P53667 647 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 RPS14P62263 151 aaKnown RBP17.6■□□□□ 0.41
KNOP1-205ENST00000568230 NRG1Q02297 640 aaPredicted RBP17.6■□□□□ 0.41
KNOP1-205ENST00000568230 ARL13BQ3SXY8 428 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 AASDHQ4L235 1098 aaPredicted RBP17.6■□□□□ 0.41
KNOP1-205ENST00000568230 ZNF776Q68DI1 518 aaPredicted RBP17.6■□□□□ 0.41
KNOP1-205ENST00000568230 FAM172AQ8WUF8 416 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 PIGKQ92643 395 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 NTAN1Q96AB6 310 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 ZNF419Q96HQ0 510 aaPredicted RBP17.6■□□□□ 0.41
KNOP1-205ENST00000568230 HSPA12BQ96MM6 686 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 MTG2Q9H4K7 406 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 EVLQ9UI08 416 aaPredicted RBP17.6■□□□□ 0.41
KNOP1-205ENST00000568230 SLCO3A1Q9UIG8 710 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 PILRBQ9UKJ0 227 aa17.6■□□□□ 0.41
KNOP1-205ENST00000568230 EDDM13A0A1B0GTR0 161 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 LNP1A1A4G5 178 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 TARSL2A2RTX5 802 aaKnown RBP17.59■□□□□ 0.41
KNOP1-205ENST00000568230 SLC30A4O14863 429 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 NDUFS2O75306 463 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 ADRA1BP35368 520 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 ZNF33AQ06730 810 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 C9orf64Q5T6V5 341 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 MANEALQ5VSG8 457 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 SETD3Q86TU7 594 aaPredicted RBP17.59■□□□□ 0.41
KNOP1-205ENST00000568230 IQCDQ96DY2 449 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 RPL10LQ96L21 214 aaKnown RBP17.59■□□□□ 0.41
KNOP1-205ENST00000568230 MCEEQ96PE7 176 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 TMEM74BQ9NUR3 256 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 MPP6Q9NZW5 540 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 PPARGC1AQ9UBK2 798 aaKnown RBP17.59■□□□□ 0.41
KNOP1-205ENST00000568230 VPS28Q9UK41 221 aa17.59■□□□□ 0.41
KNOP1-205ENST00000568230 ANKRD62A6NC57 917 aa17.58■□□□□ 0.4
KNOP1-205ENST00000568230 PATE3B3GLJ2 98 aa17.58■□□□□ 0.4
KNOP1-205ENST00000568230 KHNYNO15037 678 aaKnown RBP17.58■□□□□ 0.4
KNOP1-205ENST00000568230 RHOCP08134 193 aa17.58■□□□□ 0.4
KNOP1-205ENST00000568230 GZMAP12544 262 aa17.58■□□□□ 0.4
KNOP1-205ENST00000568230 NUMBP49757 651 aa17.58■□□□□ 0.4
KNOP1-205ENST00000568230 RPL7AP62424 266 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms