RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 ZNF132P52740 706 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 NDST2P52849 883 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 RPL7AP62424 266 aaKnown RBP5.58□□□□□ -1.52
LINC01541-202ENST00000568095 COG7P83436 770 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 CAP1Q01518 475 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 OTUD4Q01804 1114 aaKnown RBP5.58□□□□□ -1.52
LINC01541-202ENST00000568095 TARBP2Q15633 366 aaKnown RBP5.58□□□□□ -1.52
LINC01541-202ENST00000568095 BBS9Q3SYG4 887 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 ZBED5Q49AG3 693 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 PDPK2PQ6A1A2 396 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 MAP4K3Q8IVH8 894 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 CCDC60Q8IWA6 550 aaPredicted RBP5.58□□□□□ -1.52
LINC01541-202ENST00000568095 UNC45BQ8IWX7 931 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 SCAIQ8N9R8 606 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 ZNF420Q8TAQ5 688 aaPredicted RBP5.58□□□□□ -1.52
LINC01541-202ENST00000568095 TBC1D15Q8TC07 691 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 POMGNT1Q8WZA1 660 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 ISOC1Q96CN7 298 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 RTP4Q96DX8 246 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 CDHR1Q96JP9 859 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 PKP2Q99959 881 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 ZNF385DQ9H6B1 395 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 KLHL11Q9NVR0 708 aa5.58□□□□□ -1.52
LINC01541-202ENST00000568095 PTBP2Q9UKA9 531 aaKnown RBP5.58□□□□□ -1.52
LINC01541-202ENST00000568095 FAF1Q9UNN5 650 aaPredicted RBP5.58□□□□□ -1.52
LINC01541-202ENST00000568095 DNMT3AQ9Y6K1 912 aaPredicted RBP5.58□□□□□ -1.52
LINC01541-202ENST00000568095 EVPLQ92817 2033 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ARHGEF35A5YM69 484 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 WDR64B1ANS9 1081 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ZBTB14O43829 449 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 HOXC6P09630 235 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 TGFB3P10600 412 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ATF7P17544 494 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 DCKP27707 260 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 HMOX2P30519 316 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 SLC1A6P48664 564 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 YWHAZP63104 245 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 TAP1Q03518 808 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 PIGHQ14442 188 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 RFTN1Q14699 578 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 STXBP2Q15833 593 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 OCLNQ16625 522 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 MGAT5BQ3V5L5 792 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 KCTD21Q4G0X4 260 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 C2CD6Q53TS8 623 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 LGSNQ5TDP6 509 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 NANOGP8Q6NSW7 305 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 RGMBQ6NW40 437 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 SLC39A4Q6P5W5 647 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 EPGNQ6UW88 154 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 EEPD1Q7L9B9 569 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 HAUS6Q7Z4H7 955 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 GPR142Q7Z601 462 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 THNSL1Q8IYQ7 743 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 PHTF2Q8N3S3 785 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 CPSF7Q8N684 471 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 GPRC5AQ8NFJ5 357 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ACTL9Q8TC94 416 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ACMSDQ8TDX5 336 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ZNF516Q92618 1163 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 CNDP2Q96KP4 475 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ZNF512Q96ME7 567 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 PARK7Q99497 189 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 MMP19Q99542 508 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 C11orf70Q9BRQ4 267 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 OSBPL11Q9BXB4 747 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ANKRD60Q9BZ19 345 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 GCOM2Q9BZD3 368 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 UNKQ9C0B0 810 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 LIN28AQ9H9Z2 209 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ANKEF1Q9NU02 776 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 TBC1D23Q9NUY8 699 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 MARCOQ9UEW3 520 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 IPO11Q9UI26 975 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 GNPTGQ9UJJ9 305 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 DNAJC16Q9Y2G8 782 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 IKBKGQ9Y6K9 419 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 MANSC4A6NHS7 340 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ZBBXA8MT70 800 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 F8VP50 259 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 SNAI1O95863 264 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 PGK2P07205 417 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 SUPT20HL2P0C7V6 817 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 KRT5P13647 590 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 PSMC3P17980 439 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 CNTFP26441 200 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 CDH5P33151 784 aaPredicted RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 QARSP47897 775 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ACTR2P61160 394 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 KLF10Q13118 480 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 C16orf72Q14CZ0 275 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 PCLAFQ15004 111 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 FASTKD1Q53R41 847 aaKnown RBP5.57□□□□□ -1.52
LINC01541-202ENST00000568095 DEPDC1Q5TB30 811 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 C16orf46Q6P387 395 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 LYSMD3Q7Z3D4 306 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 ARFGAP1Q8N6T3 406 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 SLC7A3Q8WY07 619 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 LRRC39Q96DD0 335 aa5.57□□□□□ -1.52
LINC01541-202ENST00000568095 PLEKHA8Q96JA3 519 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms