RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 PLA2G2AP14555 144 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 DRD3P35462 400 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 ARRB1P49407 418 aaPredicted RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 PMS1P54277 932 aaKnown RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 YWHAEP62258 255 aaKnown RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 ECT2LQ008S8 904 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 SFSWAPQ12872 951 aaKnown RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 ARID5BQ14865 1188 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 RTP5Q14D33 572 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 POM121L1PQ3SYA9 428 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D3GQ6DHY5 549 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D3CQ6IPX1 549 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TAC4Q86UU9 113 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 HSCBQ8IWL3 235 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D3Q8IZP1 549 aaPredicted RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 ZNF557Q8N988 423 aaPredicted RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 SNIP1Q8TAD8 396 aaKnown RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 PTPRN2Q92932 1015 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 AZIN2Q96A70 460 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 SLC39A13Q96H72 371 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 DDX50Q9BQ39 737 aaKnown RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 IRX2Q9BZI1 471 aaPredicted RBP16.01■□□□□ 0.15
PALB2-205ENST00000567003 NRSN2Q9GZP1 204 aa16.01■□□□□ 0.15
PALB2-205ENST00000567003 TDRD6O60522 2096 aaKnown RBP16■□□□□ 0.15
PALB2-205ENST00000567003 TRIM49BA6NDI0 452 aa16■□□□□ 0.15
PALB2-205ENST00000567003 ADH1BP00325 375 aa16■□□□□ 0.15
PALB2-205ENST00000567003 PDGFRAP16234 1089 aa16■□□□□ 0.15
PALB2-205ENST00000567003 C5AR1P21730 350 aa16■□□□□ 0.15
PALB2-205ENST00000567003 GLDCP23378 1020 aa16■□□□□ 0.15
PALB2-205ENST00000567003 PRCPP42785 496 aa16■□□□□ 0.15
PALB2-205ENST00000567003 INSM1Q01101 510 aaPredicted RBP16■□□□□ 0.15
PALB2-205ENST00000567003 RNF219Q5W0B1 726 aaPredicted RBP16■□□□□ 0.15
PALB2-205ENST00000567003 NAPEPLDQ6IQ20 393 aa16■□□□□ 0.15
PALB2-205ENST00000567003 CHSY1Q86X52 802 aa16■□□□□ 0.15
PALB2-205ENST00000567003 CCDC117Q8IWD4 279 aaPredicted RBP16■□□□□ 0.15
PALB2-205ENST00000567003 ZNF843Q8N446 348 aa16■□□□□ 0.15
PALB2-205ENST00000567003 KDM1BQ8NB78 822 aa16■□□□□ 0.15
PALB2-205ENST00000567003 COL26A1Q96A83 441 aa16■□□□□ 0.15
PALB2-205ENST00000567003 FAM149B1Q96BN6 582 aa16■□□□□ 0.15
PALB2-205ENST00000567003 ARHGAP20Q9P2F6 1191 aa16■□□□□ 0.15
PALB2-205ENST00000567003 TK2O00142 265 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 TRIM38O00635 465 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 LATO43561 262 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 MOCS3O95396 460 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 CKMT2P17540 419 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 TACR2P21452 398 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 TBXAS1P24557 533 aaPredicted RBP15.99■□□□□ 0.15
PALB2-205ENST00000567003 RXRGP48443 463 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 PITX1P78337 314 aaPredicted RBP15.99■□□□□ 0.15
PALB2-205ENST00000567003 PNOCQ13519 176 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 CNGA2Q16280 664 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 PROX2Q3B8N5 592 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 SLC45A4Q5BKX6 768 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 ZC3H12AQ5D1E8 599 aaKnown RBP15.99■□□□□ 0.15
PALB2-205ENST00000567003 SYPL2Q5VXT5 272 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 PCSK4Q6UW60 755 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 KDM7AQ6ZMT4 941 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 BAP1Q92560 729 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 SLC35C1Q96A29 364 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 NAF1Q96HR8 494 aaKnown RBP15.99■□□□□ 0.15
PALB2-205ENST00000567003 SERPINB11Q96P15 392 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 MYOCQ99972 504 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 ERVMER34-1Q9H9K5 563 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 CYTH4Q9UIA0 394 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 SARDHQ9UL12 918 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 KIAA1257Q9ULG3 409 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 CLCA2Q9UQC9 943 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 TLR6Q9Y2C9 796 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 PCDHB1Q9Y5F3 818 aa15.99■□□□□ 0.15
PALB2-205ENST00000567003 SLC16A3O15427 465 aaKnown RBP15.98■□□□□ 0.15
PALB2-205ENST00000567003 SIGLEC6O43699 453 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 FBXO21O94952 628 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 ZNF202O95125 648 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 PAEPP09466 180 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 CDK4P11802 303 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 CXADRP78310 365 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 KRT85P78386 507 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 TLE3Q04726 772 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 ANKRD40Q6AI12 368 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 PRPF39Q86UA1 669 aaKnown RBP15.98■□□□□ 0.15
PALB2-205ENST00000567003 ERICH1Q86X53 443 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 SPACA3Q8IXA5 215 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 OXR1Q8N573 874 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 MFSD2AQ8NA29 543 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 FGF11Q92914 225 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 HSFY1Q96LI6 401 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 ST7Q9NRC1 585 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 ZDHHC9Q9Y397 364 aa15.98■□□□□ 0.15
PALB2-205ENST00000567003 MYF5P13349 255 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 FMO5P49326 533 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 CNTN1Q12860 1018 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 ELAVL3Q14576 367 aaKnown RBP15.97■□□□□ 0.15
PALB2-205ENST00000567003 TBC1D25Q3MII6 688 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 DENND1BQ6P3S1 775 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 RRAGAQ7L523 313 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 GPR155Q7Z3F1 870 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 ARHGEF19Q8IW93 802 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 PPM1KQ8N3J5 372 aa15.97■□□□□ 0.15
PALB2-205ENST00000567003 DCBLD1Q8N8Z6 715 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms