RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 TMEM59LQ9UK28 342 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 DMDP11532 3685 aa13.85□□□□□ -0.19
CLK3-218ENST00000566926 ZNF292O60281 2723 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 A0A1B0GVM2 712 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 A0A1W2PQF6 199 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 TCAF2A6NFQ2 919 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 FOXD2O60548 495 aaPredicted RBP13.84□□□□□ -0.19
CLK3-218ENST00000566926 ZNF217O75362 1048 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 ASLP04424 464 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 DLDP09622 509 aaKnown RBP13.84□□□□□ -0.19
CLK3-218ENST00000566926 KRT3P12035 628 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 DESP17661 470 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 SDC4P31431 198 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 RDXP35241 583 aaKnown RBP13.84□□□□□ -0.19
CLK3-218ENST00000566926 LPAL2Q16609 132 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 C2CD6Q53TS8 623 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 MBLAC2Q68D91 279 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 SERPINA13PQ6UXR4 307 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 CFAP52Q8N1V2 620 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 FAM160A2Q8N612 972 aaPredicted RBP13.84□□□□□ -0.19
CLK3-218ENST00000566926 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 TBCBQ99426 244 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 PRMT1Q99873 361 aaKnown RBP13.84□□□□□ -0.19
CLK3-218ENST00000566926 SELENOOQ9BVL4 669 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 TKTL2Q9H0I9 626 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 METTL5Q9NRN9 209 aaKnown RBP13.84□□□□□ -0.19
CLK3-218ENST00000566926 PIGVQ9NUD9 493 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 ARHGEF38Q9NXL2 777 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 CTTNBP2NLQ9P2B4 639 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 TRIM10Q9UDY6 481 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 CNOT8Q9UFF9 292 aaKnown RBP13.84□□□□□ -0.19
CLK3-218ENST00000566926 XPO7Q9UIA9 1087 aaKnown RBP13.84□□□□□ -0.19
CLK3-218ENST00000566926 DUSP10Q9Y6W6 482 aa13.84□□□□□ -0.19
CLK3-218ENST00000566926 A0A0U1RQJ8 604 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 MAP3K13O43283 966 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 PAGE1O75459 146 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 PDGFRAP16234 1089 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 GABRG2P18507 467 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 CD70P32970 193 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 FLT3P36888 993 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 P2RY2P41231 377 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 IL12RB1P42701 662 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 ST8SIA6P61647 398 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 AUHQ13825 339 aaKnown RBP13.83□□□□□ -0.2
CLK3-218ENST00000566926 ARL13BQ3SXY8 428 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 PLK5Q496M5 336 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 FNDC3BQ53EP0 1204 aaKnown RBP13.83□□□□□ -0.2
CLK3-218ENST00000566926 TMEM215Q68D42 235 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 C11orf63Q6NUN7 778 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 FBXL22Q6P050 247 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 SLC36A4Q6YBV0 504 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 ADIPOR2Q86V24 386 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 KBTBD6Q86V97 674 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 SLC35F6Q8N357 371 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 C3orf20Q8ND61 904 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 TTC17Q96AE7 1141 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 C1orf74Q96LT6 269 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 RPRD1AQ96P16 312 aaPredicted RBP13.83□□□□□ -0.2
CLK3-218ENST00000566926 SIK2Q9H0K1 926 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 FBRSQ9HAH7 460 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 SUN2Q9UH99 717 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 PCDHGA5Q9Y5G8 931 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 HS3ST4Q9Y661 456 aa13.83□□□□□ -0.2
CLK3-218ENST00000566926 WDR87Q6ZQQ6 2873 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.82□□□□□ -0.2
CLK3-218ENST00000566926 FAM170AA1A519 330 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 SIGLEC16A6NMB1 481 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 WASH3PC4AMC7 463 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 CLDN11O75508 207 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 ENDOD1O94919 500 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 EPN2O95208 641 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 EPHX1P07099 455 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 NNMTP40261 264 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 PTPN9P43378 593 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 SULT2A1Q06520 285 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 LMAN2Q12907 356 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 ZNF177Q13360 481 aaPredicted RBP13.82□□□□□ -0.2
CLK3-218ENST00000566926 SPDYCQ5MJ68 293 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 OTUD1Q5VV17 481 aaPredicted RBP13.82□□□□□ -0.2
CLK3-218ENST00000566926 PLEKHA7Q6IQ23 1121 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 KIAA1211LQ6NV74 962 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 DNAJC24Q6P3W2 148 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 STRADAQ7RTN6 431 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 DCLK2Q8N568 766 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 KDM1BQ8NB78 822 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 TPCN2Q8NHX9 752 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 ZNF564Q8TBZ8 553 aaPredicted RBP13.82□□□□□ -0.2
CLK3-218ENST00000566926 WFDC5Q8TCV5 224 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 RXFP2Q8WXD0 754 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 SORCS1Q8WY21 1168 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 ZNF592Q92610 1267 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 MYEOVQ96EZ4 313 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 LMLNQ96KR4 655 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 CFAP57Q96MR6 1250 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 WDR24Q96S15 920 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 HAPLN3Q96S86 360 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 NUP85Q9BW27 656 aa13.82□□□□□ -0.2
CLK3-218ENST00000566926 DUSP15Q9H1R2 295 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms