RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 KDM1BQ8NB78 822 aa20.86■□□□□ 0.93
RNF40-210ENST00000566811 HSPH1Q92598 858 aa20.86■□□□□ 0.93
RNF40-210ENST00000566811 LMLNQ96KR4 655 aa20.86■□□□□ 0.93
RNF40-210ENST00000566811 PRDM16Q9HAZ2 1276 aa20.86■□□□□ 0.93
RNF40-210ENST00000566811 DLGAP2Q9P1A6 1054 aa20.86■□□□□ 0.93
RNF40-210ENST00000566811 ZNF212Q9UDV6 495 aa20.86■□□□□ 0.93
RNF40-210ENST00000566811 ALG6Q9Y672 507 aa20.86■□□□□ 0.93
RNF40-210ENST00000566811 MYO18AQ92614 2054 aaKnown RBP20.85■□□□□ 0.93
RNF40-210ENST00000566811 ZFHX2Q9C0A1 2572 aaPredicted RBP20.85■□□□□ 0.93
RNF40-210ENST00000566811 DAPK3O43293 454 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 ZSCAN12O43309 604 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 RNF40O75150 1001 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 CNTN5O94779 1100 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 HNRNPLP14866 589 aaKnown RBP eCLIP20.85■□□□□ 0.93
RNF40-210ENST00000566811 POLR2EP19388 210 aaKnown RBP20.85■□□□□ 0.93
RNF40-210ENST00000566811 COMTP21964 271 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 FZD5Q13467 585 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 GEN1Q17RS7 908 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 PLEKHG6Q3KR16 790 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 ARTNQ5T4W7 220 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 CIR1Q86X95 450 aaPredicted RBP20.85■□□□□ 0.93
RNF40-210ENST00000566811 PYROXD2Q8N2H3 581 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 SPEM1Q8N4L4 309 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 LZTR1Q8N653 840 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 KIAA1524Q8TCG1 905 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 WFDC5Q8TCV5 224 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 TTC17Q96AE7 1141 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 KCTD15Q96SI1 283 aaPredicted RBP20.85■□□□□ 0.93
RNF40-210ENST00000566811 C2orf49Q9BVC5 232 aaPredicted RBP20.85■□□□□ 0.93
RNF40-210ENST00000566811 ELOVL2Q9NXB9 296 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 MPP6Q9NZW5 540 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 SALL4Q9UJQ4 1053 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 CLEC4EQ9ULY5 219 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 TFR2Q9UP52 801 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 MTF2Q9Y483 593 aaPredicted RBP20.85■□□□□ 0.93
RNF40-210ENST00000566811 SNX10Q9Y5X0 201 aa20.85■□□□□ 0.93
RNF40-210ENST00000566811 NYNRINQ9P2P1 1898 aaKnown RBP20.84■□□□□ 0.93
RNF40-210ENST00000566811 MACROD2A1Z1Q3 448 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 BUB1O43683 1085 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 GFRA3O60609 400 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 DLDP09622 509 aaKnown RBP20.84■□□□□ 0.93
RNF40-210ENST00000566811 TCF4P15884 667 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 CD70P32970 193 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 SERPINB6P35237 376 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 KIR2DL1P43626 348 aaPredicted RBP20.84■□□□□ 0.93
RNF40-210ENST00000566811 VASPP50552 380 aaPredicted RBP20.84■□□□□ 0.93
RNF40-210ENST00000566811 CDH6P55285 790 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 YBEYP58557 167 aaPredicted RBP20.84■□□□□ 0.93
RNF40-210ENST00000566811 PITRM1Q5JRX3 1037 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 TFAP2DQ7Z6R9 452 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 ZNF513Q8N8E2 541 aaPredicted RBP20.84■□□□□ 0.93
RNF40-210ENST00000566811 DCAF4L2Q8NA75 395 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 USP33Q8TEY7 942 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 ALS2CR12Q96Q35 445 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 MUC3BQ9H195 1237 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 MAGEH1Q9H213 219 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 PCDH18Q9HCL0 1135 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 GPATCH2LQ9NWQ4 482 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 PPP2R2CQ9Y2T4 447 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 DUSP10Q9Y6W6 482 aa20.84■□□□□ 0.93
RNF40-210ENST00000566811 CKAP5Q14008 2032 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 CFAP54Q96N23 3096 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 CCDC66A2RUB6 948 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 MIF4GDA9UHW6 222 aaKnown RBP20.83■□□□□ 0.93
RNF40-210ENST00000566811 RAMP2O60895 175 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 SRPRAP08240 638 aaKnown RBP20.83■□□□□ 0.93
RNF40-210ENST00000566811 GOT1P17174 413 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 CSKP41240 450 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 IRAK1P51617 712 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 CCR3P51677 355 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 TAS2R40P59535 323 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 DPYSQ14117 519 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 CA9Q16790 459 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 PARP15Q460N3 678 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 FUT11Q495W5 492 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 FSCBQ5H9T9 825 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 EOGTQ5NDL2 527 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 ZFYVE27Q5T4F4 411 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 MBLAC2Q68D91 279 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 SDE2Q6IQ49 451 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 ADIPOR2Q86V24 386 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 UMODL1-AS1Q8N2C9 162 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 LRRC57Q8N9N7 239 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 KCTD6Q8NC69 237 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 TSC1Q92574 1164 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 EZH1Q92800 747 aaPredicted RBP20.83■□□□□ 0.93
RNF40-210ENST00000566811 FEM1AQ9BSK4 669 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 CIPCQ9C0C6 399 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 VPS28Q9UK41 221 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 PLA2G4CQ9UP65 541 aa20.83■□□□□ 0.93
RNF40-210ENST00000566811 GRID2IPA4D2P6 1211 aa20.82■□□□□ 0.92
RNF40-210ENST00000566811 PRRT4C9JH25 899 aa20.82■□□□□ 0.92
RNF40-210ENST00000566811 TRIM24O15164 1050 aa20.82■□□□□ 0.92
RNF40-210ENST00000566811 PAPSS2O95340 614 aaPredicted RBP20.82■□□□□ 0.92
RNF40-210ENST00000566811 DCNP07585 359 aaKnown RBP20.82■□□□□ 0.92
RNF40-210ENST00000566811 CTNNA1P35221 906 aaKnown RBP20.82■□□□□ 0.92
RNF40-210ENST00000566811 ARSEP51690 589 aa20.82■□□□□ 0.92
RNF40-210ENST00000566811 NDST2P52849 883 aa20.82■□□□□ 0.92
RNF40-210ENST00000566811 GEMIN4P57678 1058 aaKnown RBP20.82■□□□□ 0.92
RNF40-210ENST00000566811 GNA12Q03113 381 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms