RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CCDC187A0A096LP49 1063 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 FAM90A7PA6NKC0 464 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 TTC36A6NLP5 189 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 FAM90A22PA8MWA6 464 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 FAM90A12PA8MX19 464 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 FAM90A23PA8MXZ1 464 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 EIF3CLB5ME19 914 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 GRM8O00222 908 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 PROM1O43490 865 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 KNG1P01042 644 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 JUNP05412 331 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 HMOX1P09601 288 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 CCDC175P0C221 793 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 PCP11498 1178 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 P4HA1P13674 534 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 TNNT1P13805 278 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 COX7A2P14406 83 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 GAP43P17677 238 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 TBXAS1P24557 533 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 LRPAP1P30533 357 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 GDF5P43026 501 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 PCP4P48539 62 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 GATMP50440 423 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 TOB1P50616 345 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 MFAP4P55083 255 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ITGA1P56199 1179 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 HDAC4P56524 1084 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 LOXL3P58215 753 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ERVFRD-1P60508 538 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 HMGN5P82970 282 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 EFNB1P98172 346 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 CAP1Q01518 475 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ACTN3Q08043 901 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 THOC5Q13769 683 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 PTK6Q13882 451 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 RCN2Q14257 317 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 LETM2Q2VYF4 491 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ZNF667Q5HYK9 610 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ARMC4Q5T2S8 1044 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SUSD1Q6UWL2 747 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SERPINA13PQ6UXR4 307 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 CHST3Q7LGC8 479 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 CCDC186Q7Z3E2 898 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC15A3Q8IY34 581 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 CCDC105Q8IYK2 499 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 PLD5Q8N7P1 536 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 CHST13Q8NET6 341 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SMARCC2Q8TAQ2 1214 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC2A12Q8TD20 617 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 CLEC4CQ8WTT0 213 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 PTP4A1Q93096 173 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ZKSCAN4Q969J2 545 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC7A6OSQ96CW6 309 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SHISA4Q96DD7 197 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 AK8Q96MA6 479 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 C5orf34Q96MH7 638 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 RAB3IPQ96QF0 476 aaPredicted RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 HAPLN3Q96S86 360 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SRSF8Q9BRL6 282 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 PI4K2AQ9BTU6 479 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 TSPY26PQ9H489 355 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ST6GALNAC4Q9H4F1 302 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SERHL2Q9H4I8 314 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 CYP4F11Q9HBI6 524 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 PDE11AQ9HCR9 933 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 GIMAP4Q9NUV9 329 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 TBCCD1Q9NVR7 557 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 DDX43Q9NXZ2 648 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ETAA1Q9NY74 926 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 MPP6Q9NZW5 540 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SH3BGRL2Q9UJC5 107 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 NENFQ9UMX5 172 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC12A4Q9UP95 1085 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 RRP15Q9Y3B9 282 aaKnown RBP3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 ADAM18Q9Y3Q7 739 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 FPGT-TNNI3KV9GXZ4 949 aa3.52□□□□□ -1.85
HERPUD1-211ENST00000566550 LOC105369274A0A096LPK9 316 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 LOC102723532A0A0G2JNH3 316 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TRBC2A0A5B9 178 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 A4D1N5 150 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 MBD3L5A6NJ08 208 aaPredicted RBP3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 GLOD5A6NK44 160 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 C16orf96A6NNT2 1141 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 KCNJ18B7U540 433 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 ADM5C9JUS6 153 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 EXOC3O60645 756 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 STC2O76061 302 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 WDR47O94967 919 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 CFIP05156 583 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TPOP07202 933 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 VSIG10L2P0DP72 767 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 FCER1AP12319 257 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 SELLP14151 372 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 TNFRSF1AP19438 455 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 ITGALP20701 1170 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 PTAFRP25105 342 aa3.51□□□□□ -1.85
HERPUD1-211ENST00000566550 MAPK3P27361 379 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms