RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MMP19Q99542 508 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 HERC2P3Q9BVR0 1158 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 MRPL9Q9BYD2 267 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 YTHDF1Q9BYJ9 559 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 SYTL2Q9HCH5 934 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ARHGAP28Q9P2N2 729 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 DIP2CQ9Y2E4 1556 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 MEI4A8MW99 385 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 TRIM49D1C9J1S8 452 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 AKAP3O75969 853 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 RPLP0P05388 317 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 JAK1P23458 1154 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ECT2LQ008S8 904 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 BNC1Q01954 994 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 TWF2Q6IBS0 349 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 GPR141Q7Z602 305 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 FBXW8Q8N3Y1 598 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 OR13F1Q8NGS4 319 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ETNPPLQ8TBG4 499 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 DCAKDQ8WVC6 231 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 EXT2Q93063 718 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 PKP2Q99959 881 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 EFHD1Q9BUP0 239 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 TSSK1BQ9BXA7 367 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 SLC52A2Q9HAB3 445 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 C12orf4Q9NQ89 552 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 SAGE1Q9NXZ1 904 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 PI4KBQ9UBF8 816 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 PCDHB4Q9Y5E5 795 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 MROH5Q6ZUA9 1318 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 C7orf72A4D263 438 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TAF4O00268 1085 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 GZMAP12544 262 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 MXI1P50539 228 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 HLCSP50747 726 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SLC16A1P53985 500 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 P2RX3P56373 397 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 LRRC74AQ0VAA2 488 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TRAF2Q12933 501 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 KLF10Q13118 480 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 IRF5Q13568 498 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ERICH5Q6P6B1 374 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CNSTQ6PJW8 725 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZNF598Q86UK7 904 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 CDR2LQ86X02 465 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 KRT73Q86Y46 540 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SNX29Q8TEQ0 813 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 USP13Q92995 863 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 VPS35Q96QK1 796 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 BBS4Q96RK4 519 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SSX3Q99909 188 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TBCDQ9BTW9 1192 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 APOL6Q9BWW8 343 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 NPLQ9BXD5 320 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 HDHD2Q9H0R4 259 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SMARCAD1Q9H4L7 1026 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PLEKHA5Q9HAU0 1116 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 DAPK2Q9UIK4 370 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SHOC2Q9UQ13 582 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ILVBLA1L0T0 632 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CCDC78A2IDD5 438 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 E7ESA3 106 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 HOXC11O43248 304 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZNF26P17031 533 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 M6PRP20645 277 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 GLDCP23378 1020 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 HPCAL1P37235 193 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 QARSP47897 775 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 SCNN1DP51172 638 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CDC20Q12834 499 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TRPC3Q13507 836 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 DPYSQ14117 519 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 KCTD2Q14681 263 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 GPR162Q16538 588 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 EPC2Q52LR7 807 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 USP43Q70EL4 1123 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PARP8Q8N3A8 854 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CNDP1Q96KN2 507 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZNF597Q96LX8 424 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 FAM118BQ9BPY3 351 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZNF395Q9H8N7 513 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 DBNDD1Q9H9R9 158 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SACM1LQ9NTJ5 587 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 H7C0C1 242 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 RNF103O00237 685 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 APOL1O14791 398 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 HSPA4LO95757 839 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ATP5OP48047 213 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TP53BP2Q13625 1128 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 NPTX1Q15818 432 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UBE2SQ16763 222 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ARHGEF19Q8IW93 802 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ABTB2Q8N961 1025 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 LMO3Q8TAP4 145 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SLC5A5Q92911 643 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ACAP3Q96P50 834 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 FAM111AQ96PZ2 611 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 KDM3AQ9Y4C1 1321 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TRIM38O00635 465 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 AKAP10O43572 662 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms