RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	TFE3	P19532	575 aa	Predicted RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	MZF1	P28698	734 aa	Predicted RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	STK19	P49842	368 aa	Predicted RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	IRAK1	P51617	712 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	AFF3	P51826	1226 aa	Known RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	FAM193A	P78312	1265 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	CENPC	Q03188	943 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	SULT2A1	Q06520	285 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	NME3	Q13232	169 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	CST6	Q15828	149 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	BRMS1L	Q5PSV4	323 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	ARTN	Q5T4W7	220 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	ARC	Q7LC44	396 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	BNIPL	Q7Z465	357 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	NOP9	Q86U38	636 aa	Known RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	DHX40	Q8IX18	779 aa	Known RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	ZNF683	Q8IZ20	524 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	OR52K2	Q8NGK3	314 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	EPS8L1	Q8TE68	723 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	FRS2	Q8WU20	508 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	PTPRN2	Q92932	1015 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	RNF34	Q969K3	372 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	FAM131C	Q96AQ9	280 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	BIRC7	Q96CA5	298 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	C18orf8	Q96DM3	657 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	RPL10L	Q96L21	214 aa	Known RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	RPRD1A	Q96P16	312 aa	Predicted RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	FEM1A	Q9BSK4	669 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	MIR1-1HG	Q9H1L0	117 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	SYNC	Q9H7C4	482 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	ANLN	Q9NQW6	1124 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	TMEM51	Q9NW97	253 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	TAB2	Q9NYJ8	693 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	COX16	Q9P0S2	106 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	SERGEF	Q9UGK8	458 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	NOCT	Q9UK39	431 aa	Known RBP	12	□□□□□ -0.49
KIFC3-222	ENST00000565481	VANGL2	Q9ULK5	521 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	FZD4	Q9ULV1	537 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	TBC1D30	Q9Y2I9	924 aa		12	□□□□□ -0.49
KIFC3-222	ENST00000565481	ZFYVE26	Q68DK2	2539 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	SPAAR	A0A1B0GVQ0	90 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	PES1	O00541	588 aa	Known RBP	11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	MID1	O15344	667 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	CLDN11	O75508	207 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	ADCY5	O95622	1261 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	CER1	O95813	267 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	F9	P00740	461 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	PDGFRA	P16234	1089 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	CD27	P26842	260 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	GRIA4	P48058	902 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	JAM2	P57087	298 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	NOMO3	P69849	1222 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	SIM1	P81133	766 aa	Predicted RBP	11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	SFSWAP	Q12872	951 aa	Known RBP	11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	FOXC1	Q12948	553 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	ELAVL3	Q14576	367 aa	Known RBP	11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	KRT31	Q15323	416 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	SLC25A52	Q3SY17	297 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	RNF219	Q5W0B1	726 aa	Predicted RBP	11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	IL27RA	Q6UWB1	636 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	DBX2	Q6ZNG2	339 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	C14orf80	Q86SX3	495 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	ZNF677	Q86XU0	584 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	PPP1R9B	Q96SB3	815 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	TM9SF3	Q9HD45	589 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	FBXL12	Q9NXK8	326 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	TMEM59L	Q9UK28	342 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	STAP1	Q9ULZ2	295 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	NCKAP1	Q9Y2A7	1128 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	DAAM1	Q9Y4D1	1078 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	PCDHGB2	Q9Y5G2	931 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	COL5A1	P20908	1838 aa	Predicted RBP	11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	GOLGA4	Q13439	2230 aa	Known RBP	11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	LAMA5	O15230	3695 aa		11.99	□□□□□ -0.49
KIFC3-222	ENST00000565481	ACACA	Q13085	2346 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	KNTC1	P50748	2209 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481		A0A1W2PP55	124 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	ATP9B	O43861	1147 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	SH3BP5	O60239	455 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	CBFA2T3	O75081	653 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	TOP3B	O95985	862 aa	Known RBP	11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	ADH1B	P00325	375 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	MME	P08473	750 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	VAV1	P15498	845 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	C5AR1	P21730	350 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	SLC8A1	P32418	973 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	FLT3	P36888	993 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	GGCX	P38435	758 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	CSNK1E	P49674	416 aa	Known RBP	11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	SULT1E1	P49888	294 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	GALC	P54803	685 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	CDH4	P55283	916 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	ST3GAL2	Q16842	350 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	HLA-B	Q31612	363 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	TAF3	Q5VWG9	929 aa		11.98	□□□□□ -0.49
KIFC3-222	ENST00000565481	KIAA0895L	Q68EN5	471 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms