RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 BECN1Q14457 450 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 SMAD1Q15797 465 aaKnown RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 PRAMEF14Q5SWL7 426 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CXorf57Q6NSI4 855 aaKnown RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 TRIM65Q6PJ69 517 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 ENOSF1Q7L5Y1 443 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CHSY1Q86X52 802 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CIR1Q86X95 450 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 IRF2BP1Q8IU81 584 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CCAR2Q8N163 923 aaKnown RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 OR52K2Q8NGK3 314 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 OR2T34Q8NGX1 318 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 GANCQ8TET4 914 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 SLC2A13Q96QE2 648 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CPXM1Q96SM3 734 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 OMDQ99983 421 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CRACR2AQ9BSW2 395 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 TRIM62Q9BVG3 475 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 CCDC86Q9H6F5 360 aaKnown RBP8.86□□□□□ -0.99
CAPN3-213ENST00000565173 ARHGAP20Q9P2F6 1191 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 DKK4Q9UBT3 224 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 SARDHQ9UL12 918 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 FZD4Q9ULV1 537 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 BAHCC1Q9P281 2608 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 ADAMTS20P59510 1910 aa8.86□□□□□ -0.99
CAPN3-213ENST00000565173 FAM149AA5PLN7 773 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 TRABD2BA6NFA1 517 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 LRRC72A6NJI9 287 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 LATO43561 262 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 MOCS3O95396 460 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 APOEP02649 317 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 GLI1P08151 1106 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 PDGFRAP16234 1089 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 CD38P28907 300 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 CCR1P32246 355 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 DRD3P35462 400 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 PSMD8P48556 350 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 IRAK1P51617 712 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 ADPRHP54922 357 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 FBXL22Q6P050 247 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 C19orf48Q6RUI8 117 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 SND1Q7KZF4 910 aaKnown RBP eCLIP8.85□□□□□ -0.99
CAPN3-213ENST00000565173 ADAT2Q7Z6V5 191 aaKnown RBP8.85□□□□□ -0.99
CAPN3-213ENST00000565173 GATAD2AQ86YP4 633 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 CCDC117Q8IWD4 279 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-213ENST00000565173 DEFB106AQ8N104 65 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 OR14C36Q8NHC7 312 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 SAP25Q8TEE9 199 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 SHC3Q92529 594 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 PPP1R13BQ96KQ4 1090 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 ELF4Q99607 663 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-213ENST00000565173 ACE2Q9BYF1 805 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-213ENST00000565173 ASNSD1Q9NWL6 643 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 APEX2Q9UBZ4 518 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 PCDHGC3Q9UN70 934 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 OR51B4Q9Y5P0 310 aa8.85□□□□□ -0.99
CAPN3-213ENST00000565173 KALRNO60229 2985 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 A0A1B0GVM2 712 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 TCAF2A6NFQ2 919 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 F5H5T6 163 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 I6L893 689 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 TLR4O00206 839 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 PLK4O00444 970 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ATP9BO43861 1147 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 GRAP2O75791 330 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 APC2O95996 2303 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ADH1BP00325 375 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 IL1BP01584 269 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 SLC2A3P11169 496 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 PON1P27169 355 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 CLCN1P35523 988 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 C21orf59P57076 290 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 PPP2CBP62714 309 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 PPP2CAP67775 309 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 CDK17Q00537 523 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 CENPCQ03188 943 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 SULT2A1Q06520 285 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 SFSWAPQ12872 951 aaKnown RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 AUHQ13825 339 aaKnown RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 COL9A2Q14055 689 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ELAVL3Q14576 367 aaKnown RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ARHGAP44Q17R89 818 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 C5orf22Q49AR2 442 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 EFHC1Q5JVL4 640 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ARTNQ5T4W7 220 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 TTC39BQ5VTQ0 682 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 OTUD1Q5VV17 481 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 RNF219Q5W0B1 726 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 DPY19L2P1Q6NXN4 242 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 OLFML1Q6UWY5 402 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 FAM183BPQ6ZVS7 135 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 KANSL1Q7Z3B3 1105 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 C14orf80Q86SX3 495 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 SPATS2Q86XZ4 545 aaKnown RBP8.84□□□□□ -0.99
CAPN3-213ENST00000565173 PASD1Q8IV76 773 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ZNF683Q8IZ20 524 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 GALNT15Q8N3T1 639 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 ATP6V0D2Q8N8Y2 350 aa8.84□□□□□ -0.99
CAPN3-213ENST00000565173 FAM81BQ96LP2 452 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms