RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 FAM129BQ96TA1 746 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 CDC6Q99741 560 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 VPS16Q9H269 839 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 PDCL3Q9H2J4 239 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.09■□□□□ 0.65
CLN6-204ENST00000564752 SERGEFQ9UGK8 458 aa19.09■□□□□ 0.65
CLN6-204ENST00000564752 CABIN1Q9Y6J0 2220 aa19.08■□□□□ 0.65
CLN6-204ENST00000564752 ITIH6Q6UXX5 1313 aa19.08■□□□□ 0.65
CLN6-204ENST00000564752 PKD1L2Q7Z442 2459 aa19.08■□□□□ 0.65
CLN6-204ENST00000564752 EDDM13A0A1B0GTR0 161 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 KCNU1A8MYU2 1149 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 MID1O15344 667 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 UCHL3P15374 230 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 GALCP54803 685 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 SNX16P57768 344 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 MYL5Q02045 173 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 KCNT1Q5JUK3 1230 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 CCNI2Q6ZMN8 369 aaPredicted RBP19.08■□□□□ 0.64
CLN6-204ENST00000564752 CHSY1Q86X52 802 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 MMAAQ8IVH4 418 aaKnown RBP19.08■□□□□ 0.64
CLN6-204ENST00000564752 ATP6V0D2Q8N8Y2 350 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 IGSF8Q969P0 613 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 PRMT1Q99873 361 aaKnown RBP19.08■□□□□ 0.64
CLN6-204ENST00000564752 NEUROG2Q9H2A3 272 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 SYNCQ9H7C4 482 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 FANCLQ9NW38 375 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 TOR4AQ9NXH8 423 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 ADAMTS1Q9UHI8 967 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 SLC12A6Q9UHW9 1150 aa19.08■□□□□ 0.64
CLN6-204ENST00000564752 A0A1W2PP55 124 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 A0A1W2PPC4 97 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 F5H5T6 163 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 TAF4O00268 1085 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 KCNK3O14649 394 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 DKK1O94907 266 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 GLI1P08151 1106 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 HOXB3P14651 431 aaPredicted RBP19.07■□□□□ 0.64
CLN6-204ENST00000564752 SLC8A1P32418 973 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 CTSKP43235 329 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 RACK1P63244 317 aaKnown RBP19.07■□□□□ 0.64
CLN6-204ENST00000564752 CDK17Q00537 523 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 SLC12A1Q13621 1099 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 FKBP15Q5T1M5 1219 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 NCEH1Q6PIU2 408 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 LAYNQ6UX15 382 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 FAM183BPQ6ZVS7 135 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 ANKRD20A12PQ8NF67 263 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 PTPRN2Q92932 1015 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 RPL10LQ96L21 214 aaKnown RBP19.07■□□□□ 0.64
CLN6-204ENST00000564752 SLC2A13Q96QE2 648 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 OMDQ99983 421 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 NAA15Q9BXJ9 866 aaKnown RBP19.07■□□□□ 0.64
CLN6-204ENST00000564752 FAM204AQ9H8W3 233 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 PLCB1Q9NQ66 1216 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 ASNSD1Q9NWL6 643 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 FZD4Q9ULV1 537 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 BTBD3Q9Y2F9 522 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 DSPP15924 2871 aaKnown RBP19.07■□□□□ 0.64
CLN6-204ENST00000564752 ZFYVE26Q68DK2 2539 aa19.07■□□□□ 0.64
CLN6-204ENST00000564752 FAM47DPA6NHR8 397 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 C10orf142B7Z368 130 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 F8VZ95 297 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 H0Y8X5 98 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 PCDHGA12O60330 932 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 HSF2BPO75031 334 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 RNASEH2AO75792 299 aaKnown RBP19.06■□□□□ 0.64
CLN6-204ENST00000564752 ERBB2P04626 1255 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 ATXN1LP0C7T5 689 aaKnown RBP19.06■□□□□ 0.64
CLN6-204ENST00000564752 SLC2A3P11169 496 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 CYP11B1P15538 503 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 PLK1P53350 603 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 PTPN20Q4JDL3 420 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 EFHC1Q5JVL4 640 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 RNF219Q5W0B1 726 aaPredicted RBP19.06■□□□□ 0.64
CLN6-204ENST00000564752 OR6B2Q6IFH4 312 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 DEFB106AQ8N104 65 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 CCAR2Q8N163 923 aaKnown RBP19.06■□□□□ 0.64
CLN6-204ENST00000564752 OR2T34Q8NGX1 318 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 EBF2Q9HAK2 575 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 ATRXP46100 2492 aa19.06■□□□□ 0.64
CLN6-204ENST00000564752 LRRC72A6NJI9 287 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 VILLO15195 856 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 GRAP2O75791 330 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 ABCB4P21439 1286 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 CCR1P32246 355 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 STK19P49842 368 aaPredicted RBP19.05■□□□□ 0.64
CLN6-204ENST00000564752 CCT8P50990 548 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 SULT2A1Q06520 285 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 SCAPQ12770 1279 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 TTC39BQ5VTQ0 682 aaPredicted RBP19.05■□□□□ 0.64
CLN6-204ENST00000564752 TAF3Q5VWG9 929 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 OLFML1Q6UWY5 402 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 ADAT2Q7Z6V5 191 aaKnown RBP19.05■□□□□ 0.64
CLN6-204ENST00000564752 STK40Q8N2I9 435 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 AADATQ8N5Z0 425 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 TMEM35BQ8NCS4 154 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 STK33Q9BYT3 514 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 GANQ9H2C0 597 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 DDIT4Q9NX09 232 aa19.05■□□□□ 0.64
CLN6-204ENST00000564752 ANKRD11Q6UB99 2663 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms