RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TMPRSS4Q9NRS4 437 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 AIPL1Q9NZN9 384 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 SNX10Q9Y5X0 201 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 FRYLO94915 3013 aa18.89■□□□□ 0.61
SYNGR3-204ENST00000564642 ANKRD62A6NC57 917 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 SIGLEC16A6NMB1 481 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 I6L893 689 aaPredicted RBP18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 SRGAP2O75044 1071 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 DNTTP04053 509 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 GPD1P21695 349 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 RFC1P35251 1148 aaPredicted RBP18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 PTPN9P43378 593 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 NUMBP49757 651 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 IRAK1P51617 712 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 HNRNPA1L2Q32P51 320 aaKnown RBP18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 DNAJC24Q6P3W2 148 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 STRADAQ7RTN6 431 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 FOXJ1Q92949 421 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 TOE1Q96GM8 510 aaKnown RBP18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 FEM1AQ9BSK4 669 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 RTKNQ9BST9 563 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 MTG2Q9H4K7 406 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 HAUS4Q9H6D7 363 aa18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 WSB2Q9NYS7 404 aaPredicted RBP18.88■□□□□ 0.61
SYNGR3-204ENST00000564642 TARSL2A2RTX5 802 aaKnown RBP18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 DRGXA6NNA5 263 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 E9PAM4 449 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 RNASEH1O60930 286 aaKnown RBP18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 CNTN5O94779 1100 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 ITPKAP23677 461 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 ZBTB16Q05516 673 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 KLHL30Q0D2K2 578 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 ALFQ53S48 1182 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 FIGNQ5HY92 759 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 SYCP2LQ5T4T6 812 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 SH3PXD2AQ5TCZ1 1133 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 ZNF776Q68DI1 518 aaPredicted RBP18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 TCEAL6Q6IPX3 200 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 WDR59Q6PJI9 974 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 LRSAM1Q6UWE0 723 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 DGLUCYQ7Z3D6 616 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 RGL4Q8IZJ4 473 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 MCOLN2Q8IZK6 566 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 FAM172AQ8WUF8 416 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 TCEAL3Q969E4 200 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 ZNF419Q96HQ0 510 aaPredicted RBP18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 HSPA12BQ96MM6 686 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 MUC3BQ9H195 1237 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 TMEM74BQ9NUR3 256 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 SLCO3A1Q9UIG8 710 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 SLC25A13Q9UJS0 675 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 VPS28Q9UK41 221 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 PILRBQ9UKJ0 227 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 TBC1D30Q9Y2I9 924 aa18.87■□□□□ 0.61
SYNGR3-204ENST00000564642 DOCK4Q8N1I0 1966 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 ITIH6Q6UXX5 1313 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 ATXN2Q99700 1313 aaKnown RBP18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 EDDM13A0A1B0GTR0 161 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 TMCO5BA8MYB1 307 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 TTC34A8MYJ7 566 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 PATE3B3GLJ2 98 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 SIN3BO75182 1162 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 IGLV3-19P01714 112 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 RHOCP08134 193 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 DESP17661 470 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 ADRA1BP35368 520 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 STK19P49842 368 aaPredicted RBP18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 RPS14P62263 151 aaKnown RBP18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 ARID5BQ14865 1188 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 TTC31Q49AM3 519 aaPredicted RBP18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 RAB6CQ53S08 254 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 TRIM61Q5EBN2 209 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 DCUN1D2Q6PH85 259 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 SETD3Q86TU7 594 aaPredicted RBP18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 FAM124AQ86V42 546 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 SLC41A1Q8IVJ1 513 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 ZNF683Q8IZ20 524 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 OR52K2Q8NGK3 314 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 ALG14Q96F25 216 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 VCPIP1Q96JH7 1222 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 CNTNAP3BQ96NU0 1288 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 SYT11Q9BT88 431 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 GPR174Q9BXC1 333 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 NUSAP1Q9BXS6 441 aaKnown RBP18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 CNTNAP3Q9BZ76 1288 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 TTYH3Q9C0H2 523 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 RAB6CQ9H0N0 254 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 RXFP3Q9NSD7 469 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 MPP6Q9NZW5 540 aa18.86■□□□□ 0.61
SYNGR3-204ENST00000564642 IGLV3-10A0A075B6K4 115 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 SLC30A4O14863 429 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 RRM1P23921 792 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 OR1E1P30953 314 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 HOXD12P35452 270 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 PRKCIP41743 596 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 LIMK1P53667 647 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 KRT83P78385 493 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 IRX4P78413 519 aa18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 SFSWAPQ12872 951 aaKnown RBP18.85■□□□□ 0.61
SYNGR3-204ENST00000564642 DUOXA1Q1HG43 343 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms