RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ENTPD8Q5MY95 495 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 SULT6B1Q6IMI4 303 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 KLHL17Q6TDP4 642 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 KDELC2Q7Z4H8 507 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 TMEM200AQ86VY9 491 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 VPS37AQ8NEZ2 397 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 FAM110DQ8TAY7 271 aaPredicted RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 HDHD5Q9BXW7 423 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 FRMD8Q9BZ67 464 aaPredicted RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 PABPC3Q9H361 631 aaKnown RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 ELAC1Q9H777 363 aaKnown RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 MAP6D1Q9H9H5 199 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 MRPL44Q9H9J2 332 aaKnown RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 PLCB1Q9NQ66 1216 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 ARL15Q9NXU5 204 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 HERC5Q9UII4 1024 aaKnown RBP5.33□□□□□ -1.56
UBR1-205ENST00000564540 RCE1Q9Y256 329 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 DTX4Q9Y2E6 619 aa5.33□□□□□ -1.56
UBR1-205ENST00000564540 CCDC194A0A1B0GVG4 234 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 TNFRSF13BO14836 293 aaPredicted RBP5.32□□□□□ -1.56
UBR1-205ENST00000564540 MDM4O15151 490 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 SMAD6O43541 496 aaKnown RBP5.32□□□□□ -1.56
UBR1-205ENST00000564540 IFNA2P01563 188 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 PRPH2P23942 346 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 AP2B1P63010 937 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 ICA1Q05084 483 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 RPS6KA2Q15349 733 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 TTC22Q5TAA0 569 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 ERAP2Q6P179 960 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 SLC30A9Q6PML9 568 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 LVRNQ6Q4G3 990 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 RAB11FIP2Q7L804 512 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 ANKS1BQ7Z6G8 1248 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 KLBQ86Z14 1044 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 TMEM217Q8N7C4 229 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 POF1BQ8WVV4 589 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 LPAR1Q92633 364 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 MARK4Q96L34 752 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 RMDN3Q96TC7 470 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 ARHGAP39Q9C0H5 1083 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 MAGEH1Q9H213 219 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 DACT1Q9NYF0 836 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 PKP3Q9Y446 797 aa5.32□□□□□ -1.56
UBR1-205ENST00000564540 TCRBV7S3A2A0A539 114 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 FAM90A8PA6NJQ4 464 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 EFCAB8A8MWE9 144 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 F5H423 210 aaPredicted RBP5.31□□□□□ -1.56
UBR1-205ENST00000564540 GRM8O00222 908 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 FAM90A13PP0C7W8 464 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 FAM90A24PP0C7X0 464 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 CDKN2AP42771 156 aaKnown RBP5.31□□□□□ -1.56
UBR1-205ENST00000564540 RHAGQ02094 409 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 RUSC1-AS1Q66K80 236 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 NOL8Q76FK4 1167 aaKnown RBP5.31□□□□□ -1.56
UBR1-205ENST00000564540 RRAGAQ7L523 313 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 STT3BQ8TCJ2 826 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 LYZL4Q96KX0 146 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 PDE11AQ9HCR9 933 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 SIRT3Q9NTG7 399 aaPredicted RBP5.31□□□□□ -1.56
UBR1-205ENST00000564540 TAGLN3Q9UI15 199 aa5.31□□□□□ -1.56
UBR1-205ENST00000564540 C19orf53Q9UNZ5 99 aaPredicted RBP5.31□□□□□ -1.56
UBR1-205ENST00000564540 CSTBP04080 98 aaKnown RBP5.3□□□□□ -1.56
UBR1-205ENST00000564540 SERPINA4P29622 427 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 CHRNA5P30532 468 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 ARRB2P32121 409 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 CDK7P50613 346 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 CDK18Q07002 472 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 BRD3Q15059 726 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 TBRG1Q3YBR2 411 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 LRRC24Q50LG9 513 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 ALG10Q5BKT4 473 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 ALG10BQ5I7T1 473 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 WASHC2DQ5SRD0 308 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 RNF144BQ7Z419 303 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 CTU1Q7Z7A3 348 aaKnown RBP5.3□□□□□ -1.56
UBR1-205ENST00000564540 CCDC25Q86WR0 208 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 CCDC117Q8IWD4 279 aaPredicted RBP5.3□□□□□ -1.56
UBR1-205ENST00000564540 SPICE1Q8N0Z3 855 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 ENDOVQ8N8Q3 282 aaKnown RBP5.3□□□□□ -1.56
UBR1-205ENST00000564540 B4GALNT2Q8NHY0 566 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 SLC2A12Q8TD20 617 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 ADAMTS15Q8TE58 950 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 C3orf49Q96BT1 292 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 MPHOSPH6Q99547 160 aaKnown RBP5.3□□□□□ -1.56
UBR1-205ENST00000564540 NPAS1Q99742 590 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.3□□□□□ -1.56
UBR1-205ENST00000564540 RBM38Q9H0Z9 239 aaKnown RBP5.3□□□□□ -1.56
UBR1-205ENST00000564540 HIPK2Q9H2X6 1198 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 ABHD16BQ9H3Z7 469 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 TASP1Q9H6P5 420 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 KCND3Q9UK17 655 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 ZNF580Q9UK33 172 aa5.3□□□□□ -1.56
UBR1-205ENST00000564540 LYL1P12980 280 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 KLRC2P26717 231 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 HOXA11P31270 313 aaPredicted RBP5.29□□□□□ -1.56
UBR1-205ENST00000564540 CCKBRP32239 447 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 STAT1P42224 750 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 PCP4P48539 62 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 TRIM14Q14142 442 aa5.29□□□□□ -1.56
UBR1-205ENST00000564540 SEMA3AQ14563 771 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms