RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 PTPN11Q06124 597 aaPredicted RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 CHI3L2Q15782 390 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 RALGPS1Q5JS13 557 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 LMBRD2Q68DH5 695 aaPredicted RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 TRIM72Q6ZMU5 477 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 LPCAT2Q7L5N7 544 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 USP37Q86T82 979 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 NUDCD3Q8IVD9 361 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 SLC35B2Q8TB61 432 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 CPT1BQ92523 772 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 MFSD14AQ96MC6 490 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 ADPGKQ9BRR6 497 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 NUF2Q9BZD4 464 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 TRPV6Q9H1D0 765 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 PALMDQ9NP74 551 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 TOPORSQ9NS56 1045 aaPredicted RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 APPL1Q9UKG1 709 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 PRPF19Q9UMS4 504 aaKnown RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 COQ6Q9Y2Z9 468 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 FAM32AQ9Y421 112 aaKnown RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 TRPV2Q9Y5S1 764 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 FUOMA2VDF0 154 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 SOBPA7XYQ1 873 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 KRT37O76014 449 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 PROCP04070 461 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 SNRPAP09012 282 aaKnown RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 THRAP10827 490 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 TNNI1P19237 187 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 HMOX2P30519 316 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 NSFP46459 744 aaKnown RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 BCAP31P51572 246 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 WNT7BP56706 349 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 TGFBIQ15582 683 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 LGSNQ5TDP6 509 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 SPOCD1Q6ZMY3 1216 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 SLC26A11Q86WA9 606 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 POU5F2Q8N7G0 328 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 TSPAN14Q8NG11 270 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 FAM84AQ96KN4 292 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 SNX27Q96L92 541 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 DNAJC28Q9NX36 388 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 IP6K2Q9UHH9 426 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 RIMS3Q9UJD0 308 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 OGDHLQ9ULD0 1010 aa11.33□□□□□ -0.6
TCF4-222ENST00000564228 APOBEC2Q9Y235 224 aaKnown RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 PIN4Q9Y237 131 aaKnown RBP11.33□□□□□ -0.6
TCF4-222ENST00000564228 hCG_1818297A0A087WSY0 165 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 SGK1O00141 431 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 ARVCFO00192 962 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 CHRNA1P02708 482 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 KRT1P04264 644 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 BPGMP07738 259 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 MCF2P10911 925 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 ENTPD1P49961 510 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 GCNT1Q02742 428 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 KCNC4Q03721 635 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 STX3Q13277 289 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 C16orf72Q14CZ0 275 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 PSMD6Q15008 389 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 STXBP5Q5T5C0 1151 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 PLEKHA7Q6IQ23 1121 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 IYDQ6PHW0 289 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 ELMSAN1Q6PJG2 1045 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 OLFML1Q6UWY5 402 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 TMEM192Q8IY95 271 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 DLG3Q92796 817 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 SEMA4DQ92854 862 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 CCDC124Q96CT7 223 aaKnown RBP11.32□□□□□ -0.6
TCF4-222ENST00000564228 RANBP9Q96S59 729 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
TCF4-222ENST00000564228 TMEM8AQ9HCN3 771 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 XAB2Q9HCS7 855 aaKnown RBP11.32□□□□□ -0.6
TCF4-222ENST00000564228 SCHIP1Q9P0W5 487 aaPredicted RBP11.32□□□□□ -0.6
TCF4-222ENST00000564228 STK39Q9UEW8 545 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 CPSF3Q9UKF6 684 aaKnown RBP11.32□□□□□ -0.6
TCF4-222ENST00000564228 ARHGAP26Q9UNA1 814 aa11.32□□□□□ -0.6
TCF4-222ENST00000564228 RALGAPA2Q2PPJ7 1873 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 TCRBV9S1A1TA0A576 114 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 TRIM49D1C9J1S8 452 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 GOLGA8SH3BPF8 625 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 GOLGA8MH3BSY2 632 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 ZC3H11AO75152 810 aaKnown RBP eCLIP11.31□□□□□ -0.6
TCF4-222ENST00000564228 SIN3BO75182 1162 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 BMP10O95393 424 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 RPLP2P05387 115 aaKnown RBP11.31□□□□□ -0.6
TCF4-222ENST00000564228 PDGFRBP09619 1106 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 CXCL8P10145 99 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 COL6A2P12110 1019 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 PSMC3P17980 439 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 HOXA11P31270 313 aaPredicted RBP11.31□□□□□ -0.6
TCF4-222ENST00000564228 TXNL4AP83876 142 aaKnown RBP11.31□□□□□ -0.6
TCF4-222ENST00000564228 ENPEPQ07075 957 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 PCBP1Q15365 356 aaKnown RBP eCLIP11.31□□□□□ -0.6
TCF4-222ENST00000564228 CLPPQ16740 277 aaPredicted RBP11.31□□□□□ -0.6
TCF4-222ENST00000564228 ZNF829Q3KNS6 432 aaPredicted RBP11.31□□□□□ -0.6
TCF4-222ENST00000564228 BBS9Q3SYG4 887 aa11.31□□□□□ -0.6
TCF4-222ENST00000564228 ANKRD22Q5VYY1 191 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms