RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 BBS12Q6ZW61 710 aa27.73■■■□□ 2.03
SH3GL3-205ENST00000563901 CSGALNACT1Q8TDX6 532 aa27.73■■■□□ 2.03
SH3GL3-205ENST00000563901 NECAB3Q96P71 396 aaPredicted RBP27.73■■■□□ 2.03
SH3GL3-205ENST00000563901 HEY1Q9Y5J3 304 aa27.73■■■□□ 2.03
SH3GL3-205ENST00000563901 CACNG3O60359 315 aa27.72■■■□□ 2.03
SH3GL3-205ENST00000563901 TUBB4AP04350 444 aa27.72■■■□□ 2.03
SH3GL3-205ENST00000563901 CD70P32970 193 aa27.72■■■□□ 2.03
SH3GL3-205ENST00000563901 TFDP2Q14188 446 aa27.72■■■□□ 2.03
SH3GL3-205ENST00000563901 RASGEF1CQ8N431 466 aa27.72■■■□□ 2.03
SH3GL3-205ENST00000563901 TBC1D30Q9Y2I9 924 aa27.72■■■□□ 2.03
SH3GL3-205ENST00000563901 A0A0D9SEW6 157 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 URI1O94763 535 aaPredicted RBP27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 RHOCP08134 193 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 MAPKAPK2P49137 400 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 LMAN2Q12907 356 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 PAFAH1B3Q15102 231 aaKnown RBP27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 CREG2Q8IUH2 290 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 ARHGAP12Q8IWW6 846 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 ETFBKMTQ8IXQ9 262 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 CD320Q9NPF0 282 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 HEBP1Q9NRV9 189 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 DNAJC17Q9NVM6 304 aaKnown RBP27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 EFR3BQ9Y2G0 817 aa27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 R3HDM2Q9Y2K5 976 aaKnown RBP27.71■■■□□ 2.03
SH3GL3-205ENST00000563901 TULP3O75386 442 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 TJP3O95049 919 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 MZF1P28698 734 aaPredicted RBP27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 HLA-FP30511 346 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 NR1H3Q13133 447 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 LONRF2Q1L5Z9 754 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 CCDC181Q5TID7 509 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 RNF219Q5W0B1 726 aaPredicted RBP27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 B4GALNT4Q76KP1 1039 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 OR7D4Q8NG98 312 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 KIF18AQ8NI77 898 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 SLC39A8Q9C0K1 460 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 ABCB8Q9NUT2 735 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 DTLQ9NZJ0 730 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 VCANP13611 3396 aa27.7■■■□□ 2.03
SH3GL3-205ENST00000563901 CES2O00748 559 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 SRFP11831 508 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 ACVRL1P37023 503 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 OPRD1P41143 372 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 CSKP41240 450 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 KDSRQ06136 332 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 RNF135Q8IUD6 432 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 UMODL1-AS1Q8N2C9 162 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 FIBINQ8TAL6 211 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 LMLNQ96KR4 655 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 LRRC19Q9H756 370 aa27.7■■■□□ 2.02
SH3GL3-205ENST00000563901 DFFAO00273 331 aa27.69■■■□□ 2.02
SH3GL3-205ENST00000563901 PDE2AO00408 941 aaPredicted RBP27.69■■■□□ 2.02
SH3GL3-205ENST00000563901 SIX1Q15475 284 aaPredicted RBP27.69■■■□□ 2.02
SH3GL3-205ENST00000563901 C6orf118Q5T5N4 469 aa27.69■■■□□ 2.02
SH3GL3-205ENST00000563901 AFMIDQ63HM1 303 aa27.69■■■□□ 2.02
SH3GL3-205ENST00000563901 ARHGAP36Q6ZRI8 547 aa27.69■■■□□ 2.02
SH3GL3-205ENST00000563901 HMCESQ96FZ2 354 aa27.69■■■□□ 2.02
SH3GL3-205ENST00000563901 XPO6Q96QU8 1125 aaKnown RBP27.69■■■□□ 2.02
SH3GL3-205ENST00000563901 PGRMC1O00264 195 aaKnown RBP27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 RAMP2O60895 175 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 GNA12Q03113 381 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 SETD3Q86TU7 594 aaPredicted RBP27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 SFTPA1Q8IWL2 248 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 APCDD1Q8J025 514 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 ACTRT1Q8TDG2 376 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 ATG4AQ8WYN0 398 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 AP1M1Q9BXS5 423 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 MUC3BQ9H195 1237 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 FBXO10Q9UK96 956 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 DUSP12Q9UNI6 340 aa27.68■■■□□ 2.02
SH3GL3-205ENST00000563901 RASA4BC9J798 803 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 RASA4O43374 803 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 CISD3P0C7P0 127 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 ZFXP17010 805 aaPredicted RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 TGM2P21980 687 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 GLDCP23378 1020 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 SERPINB6P35237 376 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 DGKGP49619 791 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 OTUD4Q01804 1114 aaKnown RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 POLD3Q15054 466 aaPredicted RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 FAM182AQ5T1J6 154 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 TXNDC11Q6PKC3 985 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 CCDC117Q8IWD4 279 aaPredicted RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 ACTL9Q8TC94 416 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 DNASE1L2Q92874 299 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 SLC2A4RGQ9NR83 387 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 INTS6Q9UL03 887 aaKnown RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 TTC7AQ9ULT0 858 aaPredicted RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 TRIOO75962 3097 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 APOC4-APOC2K7ER74 178 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 APOC2P02655 101 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 GEN1Q17RS7 908 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 DNTTIP2Q5QJE6 756 aaKnown RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 C1orf54Q8WWF1 131 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 P3H4Q92791 437 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 ARHGEF2Q92974 986 aaKnown RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 FEM1AQ9BSK4 669 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 SPON2Q9BUD6 331 aa27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 FBRSL1Q9HCM7 1045 aaKnown RBP27.67■■■□□ 2.02
SH3GL3-205ENST00000563901 TRPV5Q9NQA5 729 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms