RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 MUC3BQ9H195 1237 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 HAUS4Q9H6D7 363 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 VPS28Q9UK41 221 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 MYO6Q9UM54 1294 aa16.05■□□□□ 0.16
AC009088.3-201ENST00000563605 RALGAPA1Q6GYQ0 2036 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 CEP250Q9BV73 2442 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 DRGXA6NNA5 263 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 E9PAM4 449 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 ENDOD1O94919 500 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 RHOCP08134 193 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 SRPRAP08240 638 aaKnown RBP16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 GPD1P21695 349 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 SDHBP21912 280 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 RRM1P23921 792 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 MAOBP27338 520 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 NNMTP40261 264 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 OXCT1P55809 520 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 IRX4P78413 519 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 HNRNPA1L2Q32P51 320 aaKnown RBP16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 SPDYCQ5MJ68 293 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 E4F1Q66K89 784 aaPredicted RBP16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 SCYL2Q6P3W7 929 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 DGLUCYQ7Z3D6 616 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 ZNF571Q7Z3V5 609 aaPredicted RBP16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 SYT12Q8IV01 421 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 MCOLN2Q8IZK6 566 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 C3orf20Q8ND61 904 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 NETO1Q8TDF5 533 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 FAM172AQ8WUF8 416 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 HAPLN3Q96S86 360 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 DLL3Q9NYJ7 618 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 WSB2Q9NYS7 404 aaPredicted RBP16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 IFNKQ9P0W0 207 aa16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 USP36Q9P275 1121 aaKnown RBP16.04■□□□□ 0.16
AC009088.3-201ENST00000563605 GON4LQ3T8J9 2241 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 ANKRD62A6NC57 917 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 SIGLEC16A6NMB1 481 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 DNTTP04053 509 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 CFIP05156 583 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 KCNA4P22459 653 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 OXTRP30559 389 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 ADRA1BP35368 520 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 PTPN9P43378 593 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 PLK1P53350 603 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 RPL7AP62424 266 aaKnown RBP16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 SULT2A1Q06520 285 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 KLHL30Q0D2K2 578 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 ARL13BQ3SXY8 428 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 C5orf22Q49AR2 442 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 TRIM61Q5EBN2 209 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 ZNF776Q68DI1 518 aaPredicted RBP16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 DCUN1D2Q6PH85 259 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 LRSAM1Q6UWE0 723 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 BNIPLQ7Z465 357 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 ZNF683Q8IZ20 524 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 ALG14Q96F25 216 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 MCEEQ96PE7 176 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 SPON2Q9BUD6 331 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 NUP58Q9BVL2 599 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 TMEM51Q9NW97 253 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 AIPL1Q9NZN9 384 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 PILRBQ9UKJ0 227 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 TBC1D30Q9Y2I9 924 aa16.03■□□□□ 0.16
AC009088.3-201ENST00000563605 EDDM13A0A1B0GTR0 161 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 MEI4A8MW99 385 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 BNIP3LO60238 219 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 RNASEH1O60930 286 aaKnown RBP16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 TPM3P06753 285 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 VAV1P15498 845 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 OR1E1P30953 314 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 HDAC4P56524 1084 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 SYCP2LQ5T4T6 812 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 C9orf64Q5T6V5 341 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 STPG1Q5TH74 334 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 IL31Q6EBC2 164 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 RWDD4Q6NW29 188 aaKnown RBP16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 STRADAQ7RTN6 431 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 MMAAQ8IVH4 418 aaKnown RBP16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 STK40Q8N2I9 435 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 CCDC185Q8N715 623 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 KDM1BQ8NB78 822 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 CENPIQ92674 756 aaPredicted RBP16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 ZNF419Q96HQ0 510 aaPredicted RBP16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 SYT11Q9BT88 431 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 EDEM2Q9BV94 578 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 EDEM3Q9BZQ6 932 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 TTYH3Q9C0H2 523 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 MIR1-1HGQ9H1L0 117 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 RSPH9Q9H1X1 276 aaPredicted RBP16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 OR12D3Q9UGF7 316 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 SLC25A13Q9UJS0 675 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 OR51B4Q9Y5P0 310 aa16.02■□□□□ 0.16
AC009088.3-201ENST00000563605 A0A0D9SEW6 157 aa16.01■□□□□ 0.15
AC009088.3-201ENST00000563605 LNP1A1A4G5 178 aa16.01■□□□□ 0.15
AC009088.3-201ENST00000563605 TARSL2A2RTX5 802 aaKnown RBP16.01■□□□□ 0.15
AC009088.3-201ENST00000563605 C4orf47A7E2U8 309 aa16.01■□□□□ 0.15
AC009088.3-201ENST00000563605 SLC30A4O14863 429 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms