RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 SLC16A12Q6ZSM3 486 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 NRSN1Q8IZ57 195 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TBC1D3Q8IZP1 549 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 SLC25A41Q8N5S1 370 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 PRR26Q8N8Z3 221 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 ENGASEQ8NFI3 743 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 SPATA3Q8NHX4 192 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 NUDCD2Q8WVJ2 157 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 SGCZQ96LD1 299 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 MYD88Q99836 296 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TMEM120AQ9BXJ8 343 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 FRMD8Q9BZ67 464 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TP63Q9H3D4 680 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 PNRC2Q9NPJ4 139 aaKnown RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 PLK2Q9NYY3 685 aa3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 TCF20Q9UGU0 1960 aaKnown RBP3.68□□□□□ -1.82
HMGB1P33-201ENST00000563485 A0A1B0GVT2 93 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 INAFM1C9JVW0 142 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 CYP1A2P05177 515 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 LCKP06239 509 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 CHRNA5P30532 468 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 RASSF2P50749 326 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 ROR2Q01974 943 aaKnown RBP3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 RHAGQ02094 409 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 EGR4Q05215 589 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 ZBTB16Q05516 673 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 GPS2Q13227 327 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 GPR18Q14330 331 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 ZNF569Q5MCW4 686 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 CCDC25Q86WR0 208 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 GATAD2AQ86YP4 633 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 KLBQ86Z14 1044 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 SYTL1Q8IYJ3 562 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 TMEM217Q8N7C4 229 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 GABPB2Q8TAK5 448 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM110DQ8TAY7 271 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 DEPTORQ8TB45 409 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 ELP5Q8TE02 316 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 STYXQ8WUJ0 223 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM84BQ96KN1 310 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 DCLK3Q9C098 648 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 HIF1ANQ9NWT6 349 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 NCKIPSDQ9NZQ3 722 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 CDC23Q9UJX2 597 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 MAGED2Q9UNF1 606 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 ICKQ9UPZ9 632 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 CNTN6Q9UQ52 1028 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 LZTS1Q9Y250 596 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 DTX4Q9Y2E6 619 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 PTGDR2Q9Y5Y4 395 aa3.67□□□□□ -1.82
HMGB1P33-201ENST00000563485 TRBV5-7A0A0A0MS05 114 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 EME2A4GXA9 379 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM90A18PA6NE21 464 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM90A16PA6NEW6 464 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 AGAP5A6NIR3 686 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM90A9PA6NNJ1 464 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM90A5PA8MXJ8 464 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 RGS14O43566 566 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 SPRY3O43610 288 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 CAND2O75155 1236 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 TNFRSF6BO95407 300 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 LCATP04180 440 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM90A15PP0C7V4 464 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM90A14PP0C7W9 464 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 FGF3P11487 239 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 ARSBP15848 533 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 TNFSF8P32971 234 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 SLC16A2P36021 539 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 STAT1P42224 750 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 ENTPD1P49961 510 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 SELENOVP59797 346 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 PICALMQ13492 652 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 STARD3Q14849 445 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 CCDC181Q5TID7 509 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 CAPRIN2Q6IMN6 1127 aaKnown RBP3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 KIAA1324Q6UXG2 1013 aaKnown RBP3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 SRLQ86TD4 932 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 RBM23Q86U06 439 aaKnown RBP3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 MORC1Q86VD1 984 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 TMEM200AQ86VY9 491 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 FAM217AQ8IXS0 508 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 CADM3Q8N126 398 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 KDM1BQ8NB78 822 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 CMASQ8NFW8 434 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 OR1N1Q8NGS0 311 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 HMGB4Q8WW32 186 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 WDR77Q9BQA1 342 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 POLDIP3Q9BY77 421 aaKnown RBP3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 RNF146Q9NTX7 359 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 ARL15Q9NXU5 204 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 WNT16Q9UBV4 365 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 PKP3Q9Y446 797 aa3.66□□□□□ -1.82
HMGB1P33-201ENST00000563485 TCRBV7S3A2A0A539 114 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 MBD3L5A6NJ08 208 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 OR6C75A6NL08 312 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 I6L893 689 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 PAPSS2O95340 614 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 LARGE1O95461 756 aa3.65□□□□□ -1.83
HMGB1P33-201ENST00000563485 HOXC6P09630 235 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms