RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ARHGAP36Q6ZRI8 547 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 IFT20Q8IY31 132 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 FAM71DQ8N9W8 422 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 ZSCAN18Q8TBC5 510 aaPredicted RBP10.43□□□□□ -0.74
SMG1-208ENST00000563448 DEPDC1BQ8WUY9 529 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 HDAC11Q96DB2 347 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 RTP4Q96DX8 246 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 FAM161BQ96MY7 647 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 ADAM7Q9H2U9 754 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 CLDND1Q9NY35 253 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 CFAP69A5D8W1 941 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 DFFAO00273 331 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 NCAM2O15394 837 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 IFNB1P01574 187 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 MYBL2P10244 700 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 IGFBP4P22692 258 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 TNFRSF8P28908 595 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 MAPKAPK2P49137 400 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 CARSP49589 748 aaKnown RBP10.43□□□□□ -0.74
SMG1-208ENST00000563448 VPS41P49754 854 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 NDST2P52849 883 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 AP1B1Q10567 949 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 COL19A1Q14993 1142 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 CCNI2Q6ZMN8 369 aaPredicted RBP10.43□□□□□ -0.74
SMG1-208ENST00000563448 GET4Q7L5D6 327 aaPredicted RBP10.43□□□□□ -0.74
SMG1-208ENST00000563448 CPXM2Q8N436 756 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 CCNYQ8ND76 341 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 HTR3CQ8WXA8 447 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 FGF13Q92913 245 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 RETREG1Q9H6L5 497 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 PCDH9Q9HC56 1237 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 GRHL1Q9NZI5 618 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 ASIC3Q9UHC3 531 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 KIAA1549LQ6ZVL6 1849 aa10.43□□□□□ -0.74
SMG1-208ENST00000563448 A0A1B0GVM2 712 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 TCAF2A6NFQ2 919 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 TBL1XO60907 577 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 CLDN11O75508 207 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 MX2P20592 715 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 ECHS1P30084 290 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 OR1E1P30953 314 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 RPL22P35268 128 aaKnown RBP10.42□□□□□ -0.74
SMG1-208ENST00000563448 CHKAP35790 457 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 PAPOLAP51003 745 aaKnown RBP10.42□□□□□ -0.74
SMG1-208ENST00000563448 DRG2P55039 364 aaKnown RBP10.42□□□□□ -0.74
SMG1-208ENST00000563448 ATAT1Q5SQI0 421 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 HEATR6Q6AI08 1181 aaKnown RBP10.42□□□□□ -0.74
SMG1-208ENST00000563448 CHST9Q7L1S5 443 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 GSPT2Q8IYD1 628 aaKnown RBP10.42□□□□□ -0.74
SMG1-208ENST00000563448 CELF5Q8N6W0 485 aaKnown RBP10.42□□□□□ -0.74
SMG1-208ENST00000563448 CCDC89Q8N998 374 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 OR52K2Q8NGK3 314 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 IFT81Q8WYA0 676 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 RSPRY1Q96DX4 576 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 TMA16Q96EY4 203 aaKnown RBP10.42□□□□□ -0.74
SMG1-208ENST00000563448 MSLNLQ96KJ4 702 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 LRRC3BQ96PB8 259 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 BRD8Q9H0E9 1235 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 NEUROG2Q9H2A3 272 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 FAM114A2Q9NRY5 505 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 BRWD1Q9NSI6 2320 aa10.42□□□□□ -0.74
SMG1-208ENST00000563448 COL4A3Q01955 1670 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 RASA4BC9J798 803 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 DYNC1I1O14576 645 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 RASA4O43374 803 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 MAFKO60675 156 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 TUBBP07437 444 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 CCNCP24863 283 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 MCM3P25205 808 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 ADCY8P40145 1251 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 WASHC5Q12768 1159 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 P3H1Q32P28 736 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 FAM78AQ5JUQ0 283 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 TTC39BQ5VTQ0 682 aaPredicted RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 EP400NLQ6ZTU2 488 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 CCDC13Q8IYE1 715 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 MICALL1Q8N3F8 863 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 TDRD5Q8NAT2 981 aaKnown RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 HJURPQ8NCD3 748 aaPredicted RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 HMCESQ96FZ2 354 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 ASB16Q96NS5 453 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 TSGA13Q96PP4 275 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 LINC00597Q9H2U6 94 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 KIF9Q9HAQ2 790 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 DONSONQ9NYP3 566 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 MYLKQ15746 1914 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 C5orf60A6NFR6 353 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 TP73O15350 636 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 GCATO75600 419 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 H2AFXP16104 143 aaPredicted RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 VIPR2P41587 438 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 YBEYP58557 167 aaPredicted RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 ZNF33AQ06730 810 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 GPS1Q13098 491 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 CUL1Q13616 776 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 POLD3Q15054 466 aaPredicted RBP10.41□□□□□ -0.74
SMG1-208ENST00000563448 MPPE1Q53F39 396 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 ANKRD20A2Q5SQ80 823 aa10.41□□□□□ -0.74
SMG1-208ENST00000563448 ANKRD20A1Q5TYW2 823 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms