RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 RHBDF2Q6PJF5 856 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 ELMSAN1Q6PJG2 1045 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 NPNTQ6UXI9 565 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 CAPN12Q6ZSI9 719 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 TMC7Q7Z402 723 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 RELL1Q8IUW5 271 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 LRRC49Q8IUZ0 686 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 ELMOD1Q8N336 334 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 ZCCHC9Q8N567 271 aaKnown RBP9.98□□□□□ -0.81
UBFD1-202ENST00000563366 FAM71DQ8N9W8 422 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 HTR3CQ8WXA8 447 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 PLD4Q96BZ4 506 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 SLC39A13Q96H72 371 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 TTC25Q96NG3 672 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 VAT1Q99536 393 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 C2orf49Q9BVC5 232 aaPredicted RBP9.98□□□□□ -0.81
UBFD1-202ENST00000563366 NACA2Q9H009 215 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 PABPC3Q9H361 631 aaKnown RBP9.98□□□□□ -0.81
UBFD1-202ENST00000563366 FAM53CQ9NYF3 392 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 SFMBT1Q9UHJ3 866 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 DNMT3LQ9UJW3 386 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 MAGED2Q9UNF1 606 aaPredicted RBP9.98□□□□□ -0.81
UBFD1-202ENST00000563366 ATP8A1Q9Y2Q0 1164 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 INSL5Q9Y5Q6 135 aa9.98□□□□□ -0.81
UBFD1-202ENST00000563366 ANAPC1Q9H1A4 1944 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 SERTM1A2A2V5 107 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 C5orf60A6NFR6 353 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 CHADO15335 359 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 TEX28O15482 410 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 MSI1O43347 362 aaKnown RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 MFSD11O43934 449 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 OPHN1O60890 802 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 GCATO75600 419 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 SOAT2O75908 522 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 LRIG2O94898 1065 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 IGLV3-27P01718 113 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 LRG1P02750 347 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 RB1P06400 928 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 NUDT17P0C025 328 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 RBL1P28749 1068 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 CA8P35219 290 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 CTNNB1P35222 781 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 BMPR1AP36894 532 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 HSD17B3P37058 310 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 RNF144AP50876 292 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 MLLT6P55198 1093 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 BASP1P80723 227 aaKnown RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 CDK16Q00536 496 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 GBE1Q04446 702 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 IFFO1Q0D2I5 559 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 PRKD1Q15139 912 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 TEAD4Q15561 434 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 CTC1Q2NKJ3 1217 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 RNASEH2BQ5TBB1 312 aaKnown RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 MANEALQ5VSG8 457 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 PDE12Q6L8Q7 609 aaKnown RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 CENPUQ71F23 418 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 IQCKQ8N0W5 287 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 KLHL23Q8NBE8 558 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 GPR152Q8TDT2 470 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 RHBDD1Q8TEB9 315 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 GIPC2Q8TF65 315 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 PSMG2Q969U7 264 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 HDAC11Q96DB2 347 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 FCRL2Q96LA5 508 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 PPP1R2P1Q96PQ5 205 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 TXLNGYQ9BZA5 131 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 ENTPD7Q9NQZ7 604 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 OSER1Q9NX31 292 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 PPARGC1AQ9UBK2 798 aaKnown RBP9.97□□□□□ -0.81
UBFD1-202ENST00000563366 EGFL7Q9UHF1 273 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 DPP7Q9UHL4 492 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 ZNF232Q9UNY5 417 aa9.97□□□□□ -0.81
UBFD1-202ENST00000563366 GBF1Q92538 1859 aa9.96□□□□□ -0.81
UBFD1-202ENST00000563366 SLC12A8A0AV02 714 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 GOLGA8KD6RF30 607 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 E9PAM4 449 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 C5orf67F2Z3F1 127 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 FAM72CH0Y354 149 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 SEC24AO95486 1093 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 FGF19O95750 216 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 LINC00271P0C7V0 271 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 HMGA1P17096 107 aaKnown RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 PFKLP17858 780 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 RPL22P35268 128 aaKnown RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 FDFT1P37268 417 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 CTSOP43234 321 aaPredicted RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 SLC11A2P49281 568 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 HARS2P49590 506 aaKnown RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 ARL4CP56559 192 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 SARNPP82979 210 aaKnown RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 PPIDQ08752 370 aaKnown RBP9.96□□□□□ -0.82
UBFD1-202ENST00000563366 GALNT2Q10471 571 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 TWF1Q12792 350 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 HIF1AQ16665 826 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 FAM72AQ5TYM5 149 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 RASIP1Q5U651 963 aa9.96□□□□□ -0.82
UBFD1-202ENST00000563366 ITPRIPL1Q6GPH6 555 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms