RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 NRG1Q02297 640 aaPredicted RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 PTP4A2Q12974 167 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 CKAP5Q14008 2032 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 CLEC16AQ2KHT3 1053 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 TRNP1Q6NT89 227 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 PPP1R2P3Q6NXS1 205 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 LRRC31Q6UY01 552 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 STRADAQ7RTN6 431 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 PHF13Q86YI8 300 aaPredicted RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 DHX40Q8IX18 779 aaKnown RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 ZNF366Q8N895 744 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 FEM1AQ9BSK4 669 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 BTBD1Q9H0C5 482 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 PABPC3Q9H361 631 aaKnown RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 ANLNQ9NQW6 1124 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 FZD4Q9ULV1 537 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 TPX2Q9ULW0 747 aaKnown RBP12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 NCOR2Q9Y618 2525 aa12.58□□□□□ -0.4
NSMCE1-204ENST00000563273 CXorf51AA0A1B0GTR3 108 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 A0A1B0GTW7 788 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 A0A1W2PQC6 194 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 C2CD4BA6NLJ0 364 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 MEI4A8MW99 385 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 C10orf142B7Z368 130 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 GOLGA8SH3BPF8 625 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 I6L893 689 aaPredicted RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 CFIP05156 583 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 CALB1P05937 261 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 PDGFRAP16234 1089 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 FERP16591 822 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 PTMSP20962 102 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 CTSOP43234 321 aaPredicted RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 ZNF165P49910 485 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 C1QBPQ07021 282 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 ELAVL3Q14576 367 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 C2CD6Q53TS8 623 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 ARTNQ5T4W7 220 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 CAVIN1Q6NZI2 390 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 ZNF783Q6ZMS7 281 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 C14orf80Q86SX3 495 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 CIR1Q86X95 450 aaPredicted RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 RGL4Q8IZJ4 473 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 DEFB119Q8N690 84 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 C3orf20Q8ND61 904 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 C1orf216Q8TAB5 229 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 CENPIQ92674 756 aaPredicted RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 CFAP57Q96MR6 1250 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 PCDHB18PQ96TA0 734 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 FUCA2Q9BTY2 467 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 SIK2Q9H0K1 926 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 METTL5Q9NRN9 209 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 DNAAF2Q9NVR5 837 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 PPARGC1AQ9UBK2 798 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 HS3ST2Q9Y278 367 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 NCKAP1Q9Y2A7 1128 aa12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 ATXN2Q99700 1313 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-204ENST00000563273 TTC34A8MYJ7 566 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 E9PAM4 449 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 ALOX15BO15296 676 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 KCNK5O95279 499 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 SEMA4FO95754 770 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 ADH1BP00325 375 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 KRT3P12035 628 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 CEACAM1P13688 526 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 C5AR1P21730 350 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 SDC4P31431 198 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 ACSL1P33121 698 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 IRAK1P51617 712 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 ATXN3P54252 364 aaPredicted RBP12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 KRT83P78385 493 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 SLC14A1Q13336 389 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 CST6Q15828 149 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 C6orf118Q5T5N4 469 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 MON1BQ7L1V2 547 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 DSG4Q86SJ6 1040 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 DCAF4L2Q8NA75 395 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 SLC30A5Q8TAD4 765 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 FRS2Q8WU20 508 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 PTPRN2Q92932 1015 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 FAM131CQ96AQ9 280 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 VCPIP1Q96JH7 1222 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 FAM129BQ96TA1 746 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 AGPAT1Q99943 283 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 SYT11Q9BT88 431 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 C2orf49Q9BVC5 232 aaPredicted RBP12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 ADAM22Q9P0K1 906 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 SLCO3A1Q9UIG8 710 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 SLC25A13Q9UJS0 675 aa12.56□□□□□ -0.4
NSMCE1-204ENST00000563273 VPS28Q9UK41 221 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms