RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ATG14Q6ZNE5 492 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 STRA8Q7Z7C7 330 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 RSPH3Q86UC2 560 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 TOP6BLQ8N6T0 577 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 POU5F2Q8N7G0 328 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 FCRL3Q96P31 734 aaPredicted RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 VAT1Q99536 393 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 EIF2AQ9BY44 585 aaKnown RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 SETD4Q9NVD3 440 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 KLHL8Q9P2G9 620 aaPredicted RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 TRHDEQ9UKU6 1024 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 VANGL2Q9ULK5 521 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 PRPF19Q9UMS4 504 aaKnown RBP13.38□□□□□ -0.27
USB1-207ENST00000563149 POMPQ9Y244 141 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 ANKRD6Q9Y2G4 727 aa13.38□□□□□ -0.27
USB1-207ENST00000563149 C9IYK1 514 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 ADM5C9JUS6 153 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 G3V2L1 256 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 M0QYT0 321 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 PSMD3O43242 534 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 CREB3O43889 395 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 GPR32O75388 356 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 UPP2O95045 317 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 THRAP10827 490 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 UQCRBP14927 111 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 PTPN3P26045 913 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 ARRB2P32121 409 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 MTTPP55157 894 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 GJA9P57773 515 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 ADIGQ0VDE8 80 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 SCAPQ12770 1279 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 KLF10Q13118 480 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 KIZQ2M2Z5 673 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 C11orf91Q3C1V1 193 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 ANKRD20A4Q4UJ75 823 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 ITPRIPL1Q6GPH6 555 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 FSTL4Q6MZW2 842 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 SETD3Q86TU7 594 aaPredicted RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 DEFB107AQ8IZN7 70 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 SLC25A41Q8N5S1 370 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 OR52K1Q8NGK4 314 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 SLC7A14Q8TBB6 771 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 SLC26A7Q8TE54 656 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 ZNF669Q96BR6 464 aaPredicted RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 KATNBL1Q9H079 304 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 COG4Q9H9E3 785 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 LRRC4Q9HBW1 653 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 DICER1Q9UPY3 1922 aaKnown RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 A0A096LPK6 155 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 ZCWPW2A0A1B0GU75 182 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 F5H423 210 aaPredicted RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 SLCO1B7G3V0H7 640 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 HCRTO43612 131 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 FBXO21O94952 628 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 UBTFL6P0CB48 400 aaPredicted RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 NPR3P17342 541 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 GLDCP23378 1020 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 ADCYAP1R1P41586 468 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 EPHB1P54762 984 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 TBL3Q12788 808 aaKnown RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 MED21Q13503 144 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 CUL3Q13618 768 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 GLRA4Q5JXX5 417 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 KCTD11Q693B1 232 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 RAPH1Q70E73 1250 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 SDCCAG8Q86SQ7 713 aaPredicted RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 ST13P4Q8IZP2 240 aaPredicted RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 B3GALNT2Q8NCR0 500 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 URGCPQ8TCY9 931 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 CNDP1Q96KN2 507 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 BTBD9Q96Q07 612 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 SERPINI1Q99574 410 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 ILKAPQ9H0C8 392 aaPredicted RBP13.37□□□□□ -0.27
USB1-207ENST00000563149 NMRAL1Q9HBL8 299 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 RRN3Q9NYV6 651 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 BCAP29Q9UHQ4 241 aa13.37□□□□□ -0.27
USB1-207ENST00000563149 NRCAMQ92823 1304 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 SMIM35A0A1B0GVV1 85 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 SPTLC1O15269 473 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 MMP3P08254 477 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 DARSP14868 501 aaKnown RBP13.36□□□□□ -0.27
USB1-207ENST00000563149 ERCC2P18074 760 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 CYP2B6P20813 491 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 ADRA1BP35368 520 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 POLD2P49005 469 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 CLCN2P51788 898 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 SEMA3BQ13214 749 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 MPP3Q13368 585 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 DGKDQ16760 1214 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 THEMIS2Q5TEJ8 643 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 C16orf89Q6UX73 402 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 FRMD7Q6ZUT3 714 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 CMC1Q7Z7K0 106 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 KBTBD6Q86V97 674 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 TMEM126BQ8IUX1 230 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 PLD6Q8N2A8 252 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms