RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 DUSP4Q13115 394 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 RPA4Q13156 261 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 SURF1Q15526 300 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ALX1Q15699 326 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 SPRED3Q2MJR0 410 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 KCTD21Q4G0X4 260 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 C12orf60Q5U649 245 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 EEF1A1P5Q5VTE0 462 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 FBXW10Q5XX13 1052 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 FAM171BQ6P995 826 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 C6orf15Q6UXA7 325 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 CACNA2D4Q7Z3S7 1137 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 RABEPKQ7Z6M1 372 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ADGRG6Q86SQ4 1221 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ASPGQ86U10 573 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 DNAAF5Q86Y56 855 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 SLITRK4Q8IW52 837 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 DHX40Q8IX18 779 aaKnown RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF527Q8NB42 609 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 CNNM3Q8NE01 707 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF680Q8NEM1 530 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 C1orf162Q8NEQ5 155 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 TRPV1Q8NER1 839 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF461Q8TAF7 563 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 CHTF18Q8WVB6 975 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 OSCP1Q8WVF1 389 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ATL1Q8WXF7 558 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 BRF1Q92994 677 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 RFKQ969G6 155 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 NKD1Q969G9 470 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ACSBG1Q96GR2 724 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 TMEM41AQ96HV5 264 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 HES6Q96HZ4 224 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 FAM111AQ96PZ2 611 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 CDC6Q99741 560 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 BPIFA3Q9BQP9 254 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 TRIM56Q9BRZ2 755 aaKnown RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 FRMD8P1Q9BZ68 369 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 MRPL37Q9BZE1 423 aaKnown RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 GPR62Q9BZJ7 368 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 BHLHE41Q9C0J9 482 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 PHAXQ9H814 394 aaKnown RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 DMRT3Q9NQL9 472 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 INTS13Q9NVM9 706 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 CFAP97Q9P2B7 532 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ATXN10Q9UBB4 475 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 DNAJB9Q9UBS3 223 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 NAALADL1Q9UQQ1 740 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 PCDHGB2Q9Y5G2 931 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 ATP23Q9Y6H3 246 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 STON1Q9Y6Q2 735 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 UTYO14607 1347 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 PHLPP2Q6ZVD8 1323 aa5.67□□□□□ -1.5
CAPN3-211ENST00000562199 SIPA1L3O60292 1781 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-211ENST00000562199 LTN1O94822 1766 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 SLIT3O75094 1523 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 NFAT5O94916 1531 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 A0A0D9SFI3 127 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 GOLGA8QA0A0J9YX86 632 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 MACROD2A1Z1Q3 448 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 PTPDC1A2A3K4 754 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 GOLGA8OA6NCC3 632 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 SNTNA6NMZ2 147 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 BECN2A8MW95 431 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 GOLGA8NF8WBI6 632 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 TAF4O00268 1085 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 IGF2BP3O00425 579 aaKnown RBP eCLIP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 CXCL11O14625 94 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 PPEF2O14830 753 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 CLDN3O15551 220 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 RRP8O43159 456 aaKnown RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 TRAPPC3O43617 180 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 CYTIPO60759 359 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 TBX10O75333 385 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 RBBP9O75884 186 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 FKBP9O95302 570 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 TIAF1O95411 115 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 MLYCDO95822 493 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 LMNAP02545 664 aaKnown RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 AFPP02771 609 aaKnown RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 ALDH2P05091 517 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 APEHP13798 732 aaKnown RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 LTKP29376 864 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 HOXC9P31274 260 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 HNRNPH1P31943 449 aaKnown RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 NNMTP40261 264 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 GARSP41250 739 aaKnown RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 TXKP42681 527 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 MAGEA4P43358 317 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 PITPNBP48739 271 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 CAMLGP49069 296 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 ZNF41P51814 821 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 LUMP51884 338 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 ATP12AP54707 1039 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 MLLT6P55198 1093 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 GOLGA8FQ08AF8 430 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 GOLGA8DPQ0D2H9 430 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 SNW1Q13573 536 aaKnown RBP5.66□□□□□ -1.5
CAPN3-211ENST00000562199 STARD3Q14849 445 aa5.66□□□□□ -1.5
CAPN3-211ENST00000562199 NCAPHQ15003 741 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms