RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 ENDOD1O94919 500 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 LSM8O95777 96 aaKnown RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 ASLP04424 464 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 RHOCP08134 193 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 GLDCP23378 1020 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 RDXP35241 583 aaKnown RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 NOVA1P51513 510 aaKnown RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 GFPT1Q06210 699 aaPredicted RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 DUOXA1Q1HG43 343 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 CLEC16AQ2KHT3 1053 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 HNRNPA1L2Q32P51 320 aaKnown RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 SLC25A52Q3SY17 297 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 CCDC14Q49A88 953 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 SYCP2LQ5T4T6 812 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 C9orf64Q5T6V5 341 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 N4BP2L1Q5TBK1 243 aaPredicted RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF776Q68DI1 518 aaPredicted RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 LINGO4Q6UY18 593 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 ZDHHC17Q8IUH5 632 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 OR7D4Q8NG98 312 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 PTPRN2Q92932 1015 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF419Q96HQ0 510 aaPredicted RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 ERGIC2Q96RQ1 377 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 AGPAT1Q99943 283 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 SPON2Q9BUD6 331 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 NUP58Q9BVL2 599 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 SELENOOQ9BVL4 669 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 NAT10Q9H0A0 1025 aaKnown RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 RTN4Q9NQC3 1192 aaKnown RBP9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 FBXL12Q9NXK8 326 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 ARHGEF38Q9NXL2 777 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 TAS2R14Q9NYV8 317 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 ADAM22Q9P0K1 906 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 VPS28Q9UK41 221 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 ACTL7AQ9Y615 435 aa9.75□□□□□ -0.85
NSMCE1-203ENST00000562039 CACNA1EQ15878 2313 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 A0A0D9SEW6 157 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 SMTNL1A8MU46 457 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 METTL12A8MUP2 240 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 E9PAM4 449 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 K7ERQ8 282 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 TM4SF5O14894 197 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 ATMINO43313 823 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 FOXD2O60548 495 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 KCNK5O95279 499 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 SEMA4FO95754 770 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 MT-CO1P00395 513 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 IL1BP01584 269 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 SKILP12757 684 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 UNGP13051 313 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 MMP8P22894 467 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 OXTRP30559 389 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 SDC4P31431 198 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 SLC8A1P32418 973 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 RFC1P35251 1148 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 NSFP46459 744 aaKnown RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 LIMK1P53667 647 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 PTP4A2Q12974 167 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 ASIC2Q16515 512 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 WDR45BQ5MNZ6 344 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 BRMS1LQ5PSV4 323 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 DAB2IPQ5VWQ8 1189 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 E4F1Q66K89 784 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 RWDD4Q6NW29 188 aaKnown RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 SCYL2Q6P3W7 929 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 SLC23A3Q6PIS1 610 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 LEKR1Q6ZMV7 388 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 Q6ZVU0 165 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 METTL3Q86U44 580 aaKnown RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 LUZP1Q86V48 1076 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF677Q86XU0 584 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 DRC7Q8IY82 874 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF683Q8IZ20 524 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 HDDC3Q8N4P3 179 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 MINDY1Q8N5J2 469 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 CCDC185Q8N715 623 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 ZNF557Q8N988 423 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 NETO2Q8NC67 525 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 ALG14Q96F25 216 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 FAM129BQ96TA1 746 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 PSMB7Q99436 277 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 OMDQ99983 421 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 FEM1AQ9BSK4 669 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 FUCA2Q9BTY2 467 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 IRX2Q9BZI1 471 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 BTBD1Q9H0C5 482 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 RSPH9Q9H1X1 276 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 NEUROG2Q9H2A3 272 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 PABPC3Q9H361 631 aaKnown RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 IL21RQ9HBE5 538 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 CBX8Q9HC52 389 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 CAPN10Q9HC96 672 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 EVLQ9UI08 416 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 SLC25A13Q9UJS0 675 aa9.74□□□□□ -0.85
NSMCE1-203ENST00000562039 EDDM13A0A1B0GTR0 161 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 SPAARA0A1B0GVQ0 90 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 A0A1B0GVT2 93 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 LRRC10BA6NIK2 292 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 LRRC53A6NM62 1247 aa9.73□□□□□ -0.85
NSMCE1-203ENST00000562039 FAM72CH0Y354 149 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms