RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, human

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERC1-215	ENST00000561436	AASDH	Q4L235	1098 aa	Predicted RBP	4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	AARS2	Q5JTZ9	985 aa	Known RBP	4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	PCID2	Q5JVF3	399 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	TTC22	Q5TAA0	569 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	ANKRD40	Q6AI12	368 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	DGAT2L7P	Q6IED9	249 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	RRAGA	Q7L523	313 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	SLC29A4	Q7RTT9	530 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	ZNF575	Q86XF7	245 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	RASAL3	Q86YV0	1011 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	SCAMP5	Q8TAC9	235 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	CAGE1	Q8TC20	777 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	SLC22A17	Q8WUG5	538 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	VPS16	Q9H269	839 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	FSCN3	Q9NQT6	498 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	DUSP22	Q9NRW4	184 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	RASSF1	Q9NS23	344 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	SERTAD4	Q9NUC0	356 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	TMOD3	Q9NYL9	352 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	PTGFRN	Q9P2B2	879 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	ADAM21	Q9UKJ8	722 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	DAPP1	Q9UN19	280 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	RRP7A	Q9Y3A4	280 aa	Known RBP	4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	PCDHB7	Q9Y5E2	793 aa		4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.17	□□□□□ -1.74
HERC1-215	ENST00000561436	MYOM1	P52179	1685 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FLT4	P35916	1363 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	COL11A2	P13942	1736 aa	Predicted RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3D	A0A087WVF3	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3I	A0A087WXS9	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3E	A0A087X179	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3K	A0A087X1G2	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	CCDC196	A0A1B0GTZ2	297 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	GXYLT2	A0PJZ3	443 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3B	A6NDS4	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FAM90A18P	A6NE21	464 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FAM90A16P	A6NEW6	464 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	GLTPD2	A6NH11	291 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FAM90A9P	A6NNJ1	464 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FAM90A5P	A8MXJ8	464 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3L	B9A6J9	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436		E7EVH7	732 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FYB1	O15117	783 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	DHH	O43323	396 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	SPRY2	O43597	315 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	CBFA2T3	O75081	653 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	KRT38	O76015	456 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TFRC	P02786	760 aa	Known RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FAM90A15P	P0C7V4	464 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FAM90A14P	P0C7W9	464 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3H	P0C7X1	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	RXRA	P19793	462 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	PCSK6	P29122	969 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	GRK5	P34947	590 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	RFC4	P35249	363 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	DDIT3	P35638	169 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	IGHMBP2	P38935	993 aa	Known RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	RBM5	P52756	815 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	PNLIPRP1	P54315	467 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	PROK1	P58294	105 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBX2	Q13207	712 aa	Predicted RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	SLC12A1	Q13621	1099 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	L1TD1	Q5T7N2	865 aa	Known RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	JAKMIP3	Q5VZ66	844 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FAM90A2P	Q658T7	463 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3G	Q6DHY5	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3C	Q6IPX1	549 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	MSANTD2	Q6P1R3	559 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	WDR93	Q6P2C0	686 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	PIK3AP1	Q6ZUJ8	805 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	LRRTM4	Q86VH4	590 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	PRIMA1	Q86XR5	153 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FSIP1	Q8NA03	581 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	OR52L2P	Q8NGH6	319 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	CEP70	Q8NHQ1	597 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	TBC1D5	Q92609	795 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	ZNF764	Q96H86	408 aa	Predicted RBP	4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	WDYHV1	Q96HA8	205 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	HS6ST2	Q96MM7	605 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FSD1L	Q9BXM9	530 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	USP29	Q9HBJ7	922 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	RIC8A	Q9NPQ8	531 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	SAGE1	Q9NXZ1	904 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	ZNF69	Q9UC07	566 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	FEM1B	Q9UK73	627 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	SLC13A4	Q9UKG4	626 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	SUFU	Q9UMX1	484 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436	ZBTB1	Q9Y2K1	713 aa		4.16	□□□□□ -1.74
HERC1-215	ENST00000561436		A0A1W2PP64	1363 aa		4.15	□□□□□ -1.74
HERC1-215	ENST00000561436	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.15	□□□□□ -1.75
HERC1-215	ENST00000561436	C3orf70	A6NLC5	250 aa	Predicted RBP	4.15	□□□□□ -1.75
HERC1-215	ENST00000561436	HNRNPR	O43390	633 aa	Known RBP	4.15	□□□□□ -1.75
HERC1-215	ENST00000561436	TSPAN3	O60637	253 aa		4.15	□□□□□ -1.75
HERC1-215	ENST00000561436	TNNT1	P13805	278 aa		4.15	□□□□□ -1.75
HERC1-215	ENST00000561436	JUP	P14923	745 aa		4.15	□□□□□ -1.75
HERC1-215	ENST00000561436	DPEP1	P16444	411 aa		4.15	□□□□□ -1.75

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