RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 HAUS3Q68CZ6 603 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 NCEH1Q6PIU2 408 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 CPLX2Q6PUV4 134 aaKnown RBP5.58□□□□□ -1.52
HERC1-213ENST00000561359 C14orf80Q86SX3 495 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 CLEC14AQ86T13 490 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 ZC3H18Q86VM9 953 aaKnown RBP5.58□□□□□ -1.52
HERC1-213ENST00000561359 OSTM1Q86WC4 334 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 JAMLQ86YT9 394 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 TICAM1Q8IUC6 712 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 CCDC83Q8IWF9 413 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 HOMEZQ8IX15 550 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 ADGRF2Q8IZF7 708 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 ARMC10Q8N2F6 343 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 UBE2Q2Q8WVN8 375 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 SORCS1Q8WY21 1168 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 GTF3C6Q969F1 213 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 FBXO32Q969P5 355 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 MYLPFQ96A32 169 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 GRAMD1AQ96CP6 724 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 MOCOSQ96EN8 888 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 SERAC1Q96JX3 654 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 CEP295NLQ96MC4 621 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 JAKMIP1Q96N16 626 aaKnown RBP5.58□□□□□ -1.52
HERC1-213ENST00000561359 CITED4Q96RK1 184 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 DUSP9Q99956 384 aaKnown RBP5.58□□□□□ -1.52
HERC1-213ENST00000561359 NIF3L1Q9GZT8 377 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 CCSER2Q9H7U1 834 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 ERVMER34-1Q9H9K5 563 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 C17orf75Q9HAS0 396 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 ELOVL2Q9NXB9 296 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 ORC3Q9UBD5 711 aaPredicted RBP5.58□□□□□ -1.52
HERC1-213ENST00000561359 TJP2Q9UDY2 1190 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 CHORDC1Q9UHD1 332 aaPredicted RBP5.58□□□□□ -1.52
HERC1-213ENST00000561359 LSM7Q9UK45 103 aaKnown RBP5.58□□□□□ -1.52
HERC1-213ENST00000561359 RNF112Q9ULX5 631 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 NCKAP1Q9Y2A7 1128 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 C2CD2Q9Y426 696 aa5.58□□□□□ -1.52
HERC1-213ENST00000561359 MED13Q9UHV7 2174 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 HIVEP1P15822 2718 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 SCN1AP35498 2009 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 A0A096LPE4 126 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 A0A1W2PPZ6 126 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 WNT9AO14904 365 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 MTSS1O43312 755 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 FAM189A1O60320 539 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 EIF4EBP3O60516 100 aaPredicted RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 IGLV1-40P01703 118 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 GP1BAP07359 652 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 ITGA2BP08514 1039 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 OR52Z1P0C646 297 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 CKMT1AP12532 417 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 MUTP22033 750 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 YWHAQP27348 245 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 SLC5A2P31639 672 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 ACOT2P49753 483 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 MFAP3P55082 362 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 ZBTB16Q05516 673 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 PCDH1Q08174 1060 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 GOLGA8FQ08AF8 430 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 RAD51AP2Q09MP3 1159 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 GOLGA8DPQ0D2H9 430 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 KCNAB2Q13303 367 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 CAMK2GQ13555 558 aaPredicted RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 MAPRE1Q15691 268 aaKnown RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 SPRED3Q2MJR0 410 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 FNDC3BQ53EP0 1204 aaKnown RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 FAM171BQ6P995 826 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 BLOC1S2Q6QNY1 142 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 BEND4Q6ZU67 534 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 HTR3DQ70Z44 454 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 ANKS1BQ7Z6G8 1248 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 VASH2Q86V25 355 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 CCNJLQ8IV13 435 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 TRIM42Q8IWZ5 723 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 ZNF366Q8N895 744 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 PDZD8Q8NEN9 1154 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 OR4C6Q8NH72 309 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 WDR36Q8NI36 951 aaKnown RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 MIB2Q96AX9 1013 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 ARRDC3Q96B67 414 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 PRR11Q96HE9 360 aaPredicted RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 SYT15Q9BQS2 421 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 NTPCRQ9BSD7 190 aaKnown RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 TMEM60Q9H2L4 133 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 CLEC4MQ9H2X3 399 aaPredicted RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 ASB7Q9H672 318 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 SOX17Q9H6I2 414 aaPredicted RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 C7orf69Q9H7B7 122 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 EBF2Q9HAK2 575 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 CYP4F12Q9HCS2 524 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 BRMS1Q9HCU9 246 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 NPHS2Q9NP85 383 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 ZNF71Q9NQZ8 489 aaPredicted RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 GJB4Q9NTQ9 266 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 DDX19AQ9NUU7 478 aaKnown RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 SEPT10Q9P0V9 454 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 KCNG1Q9UIX4 513 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 CPSF3Q9UKF6 684 aaKnown RBP5.57□□□□□ -1.52
HERC1-213ENST00000561359 AGAP1Q9UPQ3 857 aa5.57□□□□□ -1.52
HERC1-213ENST00000561359 SLC27A6Q9Y2P4 619 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms