RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CIR1Q86X95 450 aaPredicted RBP10.99□□□□□ -0.65
TPM1-229ENST00000561242 ETFBKMTQ8IXQ9 262 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 RCOR2Q8IZ40 523 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 ACRBPQ8NEB7 543 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 USP33Q8TEY7 942 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 PRCCQ92733 491 aaPredicted RBP10.99□□□□□ -0.65
TPM1-229ENST00000561242 IGSF8Q969P0 613 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 LRRC45Q96CN5 670 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 PRMT1Q99873 361 aaKnown RBP10.99□□□□□ -0.65
TPM1-229ENST00000561242 RCOR3Q9P2K3 495 aaPredicted RBP10.99□□□□□ -0.65
TPM1-229ENST00000561242 STARD13Q9Y3M8 1113 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 SNX10Q9Y5X0 201 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 STON1Q9Y6Q2 735 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 TCF20Q9UGU0 1960 aaKnown RBP10.99□□□□□ -0.65
TPM1-229ENST00000561242 LAMA3Q16787 3333 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 A0A0A0MRY4 1105 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 CCDC66A2RUB6 948 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 BTNL10A8MVZ5 291 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 MIF4GDA9UHW6 222 aaKnown RBP10.98□□□□□ -0.65
TPM1-229ENST00000561242 CHURC1-FNTBB4DL54 471 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 C1QTNF3-AMACRE9PGA6 284 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 K7EQS6 105 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 APOL1O14791 398 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 PSTPIP1O43586 416 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 PI15O43692 258 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 KIF5CO60282 957 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 ZNF217O75362 1048 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 CISD3P0C7P0 127 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 COMTP21964 271 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 XPAP23025 273 aaPredicted RBP10.98□□□□□ -0.65
TPM1-229ENST00000561242 HLA-FP30511 346 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 CD70P32970 193 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 RENBPP51606 427 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 NDST2P52849 883 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 RWDD2BP57060 319 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 OGDHQ02218 1023 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 MTAPQ13126 283 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 EIF4EBP2Q13542 120 aaPredicted RBP10.98□□□□□ -0.65
TPM1-229ENST00000561242 CCINQ13939 588 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 ANGPT1Q15389 498 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 GEN1Q17RS7 908 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 PLEKHG6Q3KR16 790 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 TTC31Q49AM3 519 aaPredicted RBP10.98□□□□□ -0.65
TPM1-229ENST00000561242 SEL1L2Q5TEA6 688 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 HEATR6Q6AI08 1181 aaKnown RBP10.98□□□□□ -0.65
TPM1-229ENST00000561242 C11orf63Q6NUN7 778 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 POLNQ7Z5Q5 900 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 LRRC49Q8IUZ0 686 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 RTL3Q8N8U3 475 aaKnown RBP10.98□□□□□ -0.65
TPM1-229ENST00000561242 CCNYQ8ND76 341 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 CYB5D2Q8WUJ1 264 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 HMGB4Q8WW32 186 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 CASKIN2Q8WXE0 1202 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 PRICKLE1Q96MT3 831 aaPredicted RBP10.98□□□□□ -0.65
TPM1-229ENST00000561242 FEM1AQ9BSK4 669 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 DESI2Q9BSY9 194 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 LZTFL1Q9NQ48 299 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 TMEM248Q9NWD8 314 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 GPATCH2LQ9NWQ4 482 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 FBXO10Q9UK96 956 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 MMP17Q9ULZ9 603 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 ERVW-1Q9UQF0 538 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 TBC1D30Q9Y2I9 924 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 ALG6Q9Y672 507 aa10.98□□□□□ -0.65
TPM1-229ENST00000561242 EDDM13A0A1B0GTR0 161 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 TCRBV21S2A2A0A5A6 115 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 TARSL2A2RTX5 802 aaKnown RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 AXIN1O15169 862 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 ZNF189O75820 626 aaPredicted RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 MTA2O94776 668 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 CNTN5O94779 1100 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 STK10O94804 968 aaKnown RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 KRT10P13645 584 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 HNRNPLP14866 589 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM1-229ENST00000561242 GOT1P17174 413 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 ERCC2P18074 760 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 CNR2P34972 360 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 CLCN6P51797 869 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 PLK1P53350 603 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 SNRPD1P62314 119 aaKnown RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 ITKQ08881 620 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 ZNF234Q14588 700 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 TCEAL1Q15170 157 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 IER5LQ5T953 404 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 EMC10Q5UCC4 262 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 EGFLAMQ63HQ2 1017 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 CWF19L1Q69YN2 538 aaKnown RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 TIGD7Q6NT04 549 aaPredicted RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 TRNP1Q6NT89 227 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 PYROXD2Q8N2H3 581 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 ATPAF2Q8N5M1 289 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM1-229ENST00000561242 TMEM105Q8N8V8 129 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 DCAF4L2Q8NA75 395 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 KDM1BQ8NB78 822 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 OR8D1Q8WZ84 308 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 RNF25Q96BH1 459 aaPredicted RBP10.97□□□□□ -0.65
TPM1-229ENST00000561242 HAUS1Q96CS2 278 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 SIPA1Q96FS4 1042 aa10.97□□□□□ -0.65
TPM1-229ENST00000561242 PPP1R16AQ96I34 528 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms