RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	DMP1	Q13316	513 aa	Predicted RBP	7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	DHX8	Q14562	1220 aa	Known RBP	7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	ACAP1	Q15027	740 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	UPP1	Q16831	310 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	RNF151	Q2KHN1	245 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	PPM1L	Q5SGD2	360 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	LIN9	Q5TKA1	542 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	BORA	Q6PGQ7	559 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	KLHDC10	Q6PID8	442 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	DCLRE1A	Q6PJP8	1040 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	ALKAL1	Q6UXT8	129 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	CYP26C1	Q6V0L0	522 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	GPR65	Q8IYL9	337 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	LGI4	Q8N135	537 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	LRRC15	Q8TF66	581 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	STAM	Q92783	540 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	PRRX2	Q99811	253 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	CCDC94	Q9BW85	323 aa	Predicted RBP	7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	RAB34	Q9BZG1	259 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	SPTBN4	Q9H254	2564 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	ZDHHC7	Q9NXF8	308 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	IGSF9	Q9P2J2	1179 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	ANKFY1	Q9P2R3	1169 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	EPS15L1	Q9UBC2	864 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	ZMYM2	Q9UBW7	1377 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	FBXW11	Q9UKB1	542 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	DUSP12	Q9UNI6	340 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	CDY1	Q9Y6F8	540 aa		7.65	□□□□□ -1.18
MARK3-223	ENST00000561071	TRIP11	Q15643	1979 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	PHLPP2	Q6ZVD8	1323 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	C2orf78	A6NCI8	922 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	LAD1	O00515	517 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	PODXL	O00592	558 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	SEC24D	O94855	1032 aa	Predicted RBP	7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	PLA2G4B	P0C869	781 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	MCF2	P10911	925 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	OSM	P13725	252 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	AOC1	P19801	751 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	PROZ	P22891	400 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	CNR2	P34972	360 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	SLC12A3	P55017	1021 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	ARPP19	P56211	112 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	GPC5	P78333	572 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	CREM	Q03060	361 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	CD69	Q07108	199 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	HTR4	Q13639	388 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	PCBP2	Q15366	365 aa	Known RBP eCLIP	7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	RILPL1	Q5EBL4	403 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	XKR4	Q5GH76	650 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	ZMAT1	Q5H9K5	638 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	PARM1	Q6UWI2	310 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	USP30	Q70CQ3	517 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	SYT2	Q8N9I0	419 aa	Predicted RBP	7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	TMEM161B	Q8NDZ6	487 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	OR14K1	Q8NGZ2	314 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	TSPEAR	Q8WU66	669 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	ING5	Q8WYH8	240 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	FGF13	Q92913	245 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	FGF14	Q92915	247 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	RAX2	Q96IS3	184 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	FAXDC2	Q96IV6	333 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	SNX27	Q96L92	541 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	NTPCR	Q9BSD7	190 aa	Known RBP	7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	RHOBTB2	Q9BYZ6	727 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	OR10A2	Q9H208	303 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	DNMT3B	Q9UBC3	853 aa	Known RBP	7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	MTRR	Q9UBK8	725 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	SMC3	Q9UQE7	1217 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	VWA7	Q9Y334	891 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	DOCK8	Q8NF50	2099 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	VWA8	A3KMH1	1905 aa		7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	MTCL1	Q9Y4B5	1905 aa	Known RBP	7.64	□□□□□ -1.19
MARK3-223	ENST00000561071	ANHX	E9PGG2	379 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	TMEM189-UBE2V1	I3L0A0	370 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	SEC24A	O95486	1093 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	CNOT4	O95628	575 aa	Known RBP	7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	C1R	P00736	705 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	DCN	P07585	359 aa	Known RBP	7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	INHBB	P09529	407 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	HNRNPA1	P09651	372 aa	Known RBP eCLIP	7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	GPR15	P49685	360 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	MGAT5	Q09328	741 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	ELAVL2	Q12926	359 aa	Known RBP	7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	SPIDR	Q14159	915 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	MUM1	Q2TAK8	710 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	TMEM119	Q4V9L6	283 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	SPECC1	Q5M775	1068 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	HYI	Q5T013	277 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	ASCL5	Q7RTU5	278 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	FRMD5	Q7Z6J6	570 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	GPBP1	Q86WP2	473 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	PPP1R14C	Q8TAE6	165 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	CDK5RAP3	Q96JB5	506 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	UROC1	Q96N76	676 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	SLC2A13	Q96QE2	648 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	KXD1	Q9BQD3	176 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	TBC1D17	Q9HA65	648 aa		7.63	□□□□□ -1.19
MARK3-223	ENST00000561071	MKS1	Q9NXB0	559 aa		7.63	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms