RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MAFKO60675 156 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 LPXNO60711 386 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 AGTP01019 485 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 LRG1P02750 347 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 GSTA2P09210 222 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 PFKLP17858 780 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 LMAN1P49257 510 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 KCNQ1P51787 676 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 YBEYP58557 167 aaPredicted RBP17.54■□□□□ 0.4
HDDC3-206ENST00000561036 FASTKD3Q14CZ7 662 aaKnown RBP17.54■□□□□ 0.4
HDDC3-206ENST00000561036 ANO4Q32M45 955 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 UBAP2Q5T6F2 1119 aaKnown RBP17.54■□□□□ 0.4
HDDC3-206ENST00000561036 NADSYN1Q6IA69 706 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 TMEM150AQ86TG1 271 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 CAND1Q86VP6 1230 aaKnown RBP17.54■□□□□ 0.4
HDDC3-206ENST00000561036 PALM2Q8IXS6 379 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 ELMOD1Q8N336 334 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 RIBC1Q8N443 379 aaPredicted RBP17.54■□□□□ 0.4
HDDC3-206ENST00000561036 NETO2Q8NC67 525 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 KREMEN2Q8NCW0 462 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 TLCD1Q96CP7 247 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 SAMD11Q96NU1 681 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 CENPHQ9H3R5 247 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 IL21Q9HBE4 155 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 MPP6Q9NZW5 540 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 ADAM21Q9UKJ8 722 aa17.54■□□□□ 0.4
HDDC3-206ENST00000561036 PLXNA4Q9HCM2 1894 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 C2orf71A6NGG8 1288 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 ARHGAP42A6NI28 874 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 STC2O76061 302 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 OLFM2O95897 454 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 GLUD1P00367 558 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 CCNB1P14635 433 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 PSMB4P28070 264 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 ERVFC1P60507 584 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 PRPSAP1Q14558 356 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 RASA2Q15283 850 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 PARP15Q460N3 678 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 TNFAIP8L3Q5GJ75 292 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 PDE12Q6L8Q7 609 aaKnown RBP17.53■□□□□ 0.4
HDDC3-206ENST00000561036 TDRPQ86YL5 185 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 KLHDC8BQ8IXV7 354 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 ARFGAP2Q8N6H7 521 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 FBXO36Q8NEA4 188 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 UHMK1Q8TAS1 419 aaKnown RBP17.53■□□□□ 0.4
HDDC3-206ENST00000561036 ZSCAN18Q8TBC5 510 aaPredicted RBP17.53■□□□□ 0.4
HDDC3-206ENST00000561036 IGSF8Q969P0 613 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 RPRD1AQ96P16 312 aaPredicted RBP17.53■□□□□ 0.4
HDDC3-206ENST00000561036 IL12RB2Q99665 862 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 NOL6Q9H6R4 1146 aaKnown RBP17.53■□□□□ 0.4
HDDC3-206ENST00000561036 VPS37BQ9H9H4 285 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 ZNF334Q9HCZ1 680 aaPredicted RBP17.53■□□□□ 0.4
HDDC3-206ENST00000561036 TLR9Q9NR96 1032 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 ZNF212Q9UDV6 495 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 RSPH14Q9UHP6 348 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 LGALS13Q9UHV8 139 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 NR2E3Q9Y5X4 410 aa17.53■□□□□ 0.4
HDDC3-206ENST00000561036 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.53■□□□□ 0.4
HDDC3-206ENST00000561036 TLDC2A0PJX2 215 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 A6NNZ2 444 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 AP3B1O00203 1094 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 ZBTB24O43167 697 aaPredicted RBP17.52■□□□□ 0.4
HDDC3-206ENST00000561036 CACNG3O60359 315 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 CDH16O75309 829 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 SUN1O94901 812 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 FGF19O95750 216 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 JCHAINP01591 159 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 C8AP07357 584 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 ATP5DP30049 168 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 ELK3P41970 407 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 MMP13P45452 471 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 IFNAR2P48551 515 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 PAPOLAP51003 745 aaKnown RBP17.52■□□□□ 0.4
HDDC3-206ENST00000561036 ZBTB17Q13105 803 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 TUBB8Q3ZCM7 444 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 ALFQ53S48 1182 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 FAM133BQ5BKY9 247 aaKnown RBP17.52■□□□□ 0.4
HDDC3-206ENST00000561036 RABGAP1LQ5R372 815 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 KCTD16Q68DU8 428 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 LRRC8BQ6P9F7 803 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 KDM7AQ6ZMT4 941 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 ANKMY2Q8IV38 441 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 LGI2Q8N0V4 545 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 EPS8L3Q8TE67 593 aaKnown RBP17.52■□□□□ 0.4
HDDC3-206ENST00000561036 POF1BQ8WVV4 589 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 MAML1Q92585 1016 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 LRRC3Q9BY71 257 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 RNF38Q9H0F5 515 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 ALG13Q9NP73 1137 aaKnown RBP17.52■□□□□ 0.4
HDDC3-206ENST00000561036 NDFIP2Q9NV92 336 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 PSD3Q9NYI0 1048 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 BCCIPQ9P287 314 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDDC3-206ENST00000561036 SLC24A2Q9UI40 661 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 STOML2Q9UJZ1 356 aa17.52■□□□□ 0.4
HDDC3-206ENST00000561036 C2orf78A6NCI8 922 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 RASA4BC9J798 803 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 RASA4O43374 803 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 CNTN5O94779 1100 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 AP2A1O95782 977 aa17.51■□□□□ 0.39
HDDC3-206ENST00000561036 SPATA31D3P0C874 917 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms