RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ADAMTS1Q9UHI8 967 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 FZD4Q9ULV1 537 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 A0A1W2PPC4 97 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 FLRT2O43155 660 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 RNASEH2AO75792 299 aaKnown RBP16.72■□□□□ 0.27
SNX1-213ENST00000561026 PDGFRAP16234 1089 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 MZF1P28698 734 aaPredicted RBP16.72■□□□□ 0.27
SNX1-213ENST00000561026 STK19P49842 368 aaPredicted RBP16.72■□□□□ 0.27
SNX1-213ENST00000561026 OXCT1P55809 520 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 SLC6A3Q01959 620 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 NME3Q13232 169 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 SUZ12Q15022 739 aaKnown RBP16.72■□□□□ 0.27
SNX1-213ENST00000561026 PTPN20Q4JDL3 420 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 KCNT1Q5JUK3 1230 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 CXorf57Q6NSI4 855 aaKnown RBP16.72■□□□□ 0.27
SNX1-213ENST00000561026 DPY19L2P1Q6NXN4 242 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 LAYNQ6UX15 382 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 SLC26A9Q7LBE3 791 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 FAM114A1Q8IWE2 563 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 STK40Q8N2I9 435 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 BAHD1Q8TBE0 780 aaPredicted RBP16.72■□□□□ 0.27
SNX1-213ENST00000561026 IGSF8Q969P0 613 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 RPRD1AQ96P16 312 aaPredicted RBP16.72■□□□□ 0.27
SNX1-213ENST00000561026 NDST4Q9H3R1 872 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 SYNCQ9H7C4 482 aa16.72■□□□□ 0.27
SNX1-213ENST00000561026 APOBEC2Q9Y235 224 aaKnown RBP16.72■□□□□ 0.27
SNX1-213ENST00000561026 LRRC72A6NJI9 287 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 C10orf142B7Z368 130 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 KCNK3O14649 394 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 PNMA6AP0CW24 399 aaPredicted RBP16.71■□□□□ 0.27
SNX1-213ENST00000561026 GOT1P17174 413 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 C5AR1P21730 350 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 ERCC5P28715 1186 aaPredicted RBP16.71■□□□□ 0.27
SNX1-213ENST00000561026 NOS2P35228 1153 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 NUMBP49757 651 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 BPIFB4P59827 614 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 RACK1P63244 317 aaKnown RBP16.71■□□□□ 0.27
SNX1-213ENST00000561026 AUHQ13825 339 aaKnown RBP16.71■□□□□ 0.27
SNX1-213ENST00000561026 ELAVL3Q14576 367 aaKnown RBP16.71■□□□□ 0.27
SNX1-213ENST00000561026 DPCR1Q3MIW9 517 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 VWA3BQ502W6 1294 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 MIIPQ5JXC2 388 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 SLCO6A1Q86UG4 719 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 AADATQ8N5Z0 425 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 ZNF397Q8NF99 534 aaPredicted RBP16.71■□□□□ 0.27
SNX1-213ENST00000561026 OR2T34Q8NGX1 318 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 RHBDD1Q8TEB9 315 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 ZCCHC14Q8WYQ9 949 aaKnown RBP16.71■□□□□ 0.27
SNX1-213ENST00000561026 ALG14Q96F25 216 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 PPP1R9BQ96SB3 815 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 CDC6Q99741 560 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 TUBGCP2Q9BSJ2 902 aa16.71■□□□□ 0.27
SNX1-213ENST00000561026 M0QYT0 321 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 VILLO15195 856 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 DAB1O75553 588 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 ADH1BP00325 375 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 PRKCSHP14314 528 aaPredicted RBP16.7■□□□□ 0.26
SNX1-213ENST00000561026 VAV1P15498 845 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 CTSKP43235 329 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 PSMD8P48556 350 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 VASPP50552 380 aaPredicted RBP16.7■□□□□ 0.26
SNX1-213ENST00000561026 CENPCQ03188 943 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 SND1Q7KZF4 910 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNX1-213ENST00000561026 ADAT2Q7Z6V5 191 aaKnown RBP16.7■□□□□ 0.26
SNX1-213ENST00000561026 ZDHHC17Q8IUH5 632 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 FRS2Q8WU20 508 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 FEM1AQ9BSK4 669 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 ACE2Q9BYF1 805 aaPredicted RBP16.7■□□□□ 0.26
SNX1-213ENST00000561026 EBF2Q9HAK2 575 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 VANGL2Q9ULK5 521 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 BTBD3Q9Y2F9 522 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 HS3ST4Q9Y661 456 aa16.7■□□□□ 0.26
SNX1-213ENST00000561026 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.69■□□□□ 0.26
SNX1-213ENST00000561026 SRRM3A6NNA2 597 aaPredicted RBP16.69■□□□□ 0.26
SNX1-213ENST00000561026 H0Y8X5 98 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 PCDHGA12O60330 932 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 DFNA5O60443 496 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 PAGE1O75459 146 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 IL1BP01584 269 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 IRAK1P51617 712 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 CCR5P51681 352 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 C21orf59P57076 290 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 ZNF177Q13360 481 aaPredicted RBP16.69■□□□□ 0.26
SNX1-213ENST00000561026 DRAP1Q14919 205 aaPredicted RBP16.69■□□□□ 0.26
SNX1-213ENST00000561026 C5orf22Q49AR2 442 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 HSP90AA4PQ58FG1 418 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 OTUD1Q5VV17 481 aaPredicted RBP16.69■□□□□ 0.26
SNX1-213ENST00000561026 LRSAM1Q6UWE0 723 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 TMEM35BQ8NCS4 154 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 OR52K2Q8NGK3 314 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 OR14C36Q8NHC7 312 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 SLC6A18Q96N87 628 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 SPAG5Q96R06 1193 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 NPY6RQ99463 290 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 PIGVQ9NUD9 493 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 TOR4AQ9NXH8 423 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 RRN3Q9NYV6 651 aa16.69■□□□□ 0.26
SNX1-213ENST00000561026 OR51B4Q9Y5P0 310 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms