RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ERLEC1Q96DZ1 483 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 ABHD8Q96I13 439 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 COX4I2Q96KJ9 171 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 ILKAPQ9H0C8 392 aaPredicted RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 MTMR10Q9NXD2 777 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 ZNHIT2Q9UHR6 403 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 BTAF1O14981 1849 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 JUNP05412 331 aaKnown RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 TPSB2P20231 275 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 RGS7P49802 495 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 PFKPQ01813 784 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 BAATQ14032 418 aaPredicted RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 TPSAB1Q15661 275 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 RSBN1LQ6PCB5 846 aaPredicted RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 DHRS4L2Q6PKH6 230 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 KCNT2Q6UVM3 1135 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 CDKL3Q8IVW4 592 aaPredicted RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 PPWD1Q96BP3 646 aaKnown RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 ZNF597Q96LX8 424 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 SNRNP25Q9BV90 132 aaKnown RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 OSBPL11Q9BXB4 747 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 NOL11Q9H8H0 719 aaKnown RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 JPH1Q9HDC5 661 aaPredicted RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 PNPLA3Q9NST1 481 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 FZD1Q9UP38 647 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 COQ6Q9Y2Z9 468 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 CTDP1Q9Y5B0 961 aaPredicted RBP16.84■□□□□ 0.29
TPM1-228ENST00000560975 C2CD4BA6NLJ0 364 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 G3V2L1 256 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 PLA2G6O60733 806 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 PPARGP37231 505 aaPredicted RBP16.83■□□□□ 0.29
TPM1-228ENST00000560975 OXCT1P55809 520 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 ESRRGP62508 458 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 BTG3Q14201 252 aaPredicted RBP16.83■□□□□ 0.29
TPM1-228ENST00000560975 SEL1L3Q68CR1 1132 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 ZNF786Q8N393 782 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 RSPH1Q8WYR4 309 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 ZNF668Q96K58 619 aaPredicted RBP16.83■□□□□ 0.29
TPM1-228ENST00000560975 AGAP3Q96P47 875 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 XYLT2Q9H1B5 865 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 PORCNQ9H237 461 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 EFCAB1Q9HAE3 211 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 IGSF9Q9P2J2 1179 aa16.83■□□□□ 0.29
TPM1-228ENST00000560975 GPR25O00155 361 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 TRIM13O60858 407 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 SERPINB7O75635 380 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 ALDH1A2O94788 518 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 NR3C2P08235 984 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 OCM2P0CE71 109 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 OCMP0CE72 109 aaPredicted RBP16.83■□□□□ 0.28
TPM1-228ENST00000560975 CYP2F1P24903 491 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 ETFBP38117 255 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 NAMPTP43490 491 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 RALGDSQ12967 914 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 CBLBQ13191 982 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 OLIG2Q13516 323 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 INSCQ1MX18 579 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 FAM183BPQ6ZVS7 135 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 GPR180Q86V85 440 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 CLK4Q9HAZ1 481 aaKnown RBP16.83■□□□□ 0.28
TPM1-228ENST00000560975 SLC38A7Q9NVC3 462 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 SYBUQ9NX95 663 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 MFHAS1Q9Y4C4 1052 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 ARID2Q68CP9 1835 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 DOCK5Q9H7D0 1870 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 RGPD3A6NKT7 1758 aaPredicted RBP16.83■□□□□ 0.28
TPM1-228ENST00000560975 RGPD4Q7Z3J3 1758 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 FBP2O00757 339 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 GIPC1O14908 333 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 ATE1O95260 518 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 PIGNO95427 931 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 PIGRP01833 764 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 KCNA2P16389 499 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 SAT1P21673 171 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 NUMBP49757 651 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 CCDC153Q494R4 210 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 RDM1Q8NG50 284 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 SCAF8Q9UPN6 1271 aaKnown RBP16.83■□□□□ 0.28
TPM1-228ENST00000560975 SQORQ9Y6N5 450 aa16.83■□□□□ 0.28
TPM1-228ENST00000560975 AHDC1Q5TGY3 1603 aaPredicted RBP16.82■□□□□ 0.28
TPM1-228ENST00000560975 MATN2O00339 956 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 GCATO75600 419 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 ZBTB11O95625 1053 aaPredicted RBP16.82■□□□□ 0.28
TPM1-228ENST00000560975 PTPN11Q06124 597 aaPredicted RBP16.82■□□□□ 0.28
TPM1-228ENST00000560975 XKR3Q5GH77 459 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 STEAP4Q687X5 459 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 HEATR6Q6AI08 1181 aaKnown RBP16.82■□□□□ 0.28
TPM1-228ENST00000560975 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 HEXIM2Q96MH2 286 aaKnown RBP16.82■□□□□ 0.28
TPM1-228ENST00000560975 ELOVL4Q9GZR5 314 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 A0A096LPK6 155 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 FUOMA2VDF0 154 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 HDAC3O15379 428 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 ZFXP17010 805 aaPredicted RBP16.82■□□□□ 0.28
TPM1-228ENST00000560975 GARSP41250 739 aaKnown RBP16.82■□□□□ 0.28
TPM1-228ENST00000560975 HALP42357 657 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 MAPK10P53779 464 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 PDK2Q15119 407 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 CCDC14Q49A88 953 aa16.82■□□□□ 0.28
TPM1-228ENST00000560975 GK5Q6ZS86 529 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms