RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 H1FNTQ75WM6 255 aaPredicted RBP6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 PXKQ7Z7A4 578 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 LINC00346Q8IVM7 164 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF34Q8IZ26 560 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 TAGAPQ8N103 731 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 TTLL11Q8NHH1 800 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 CEP95Q96GE4 821 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 MRPL46Q9H2W6 279 aaKnown RBP6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 PABPC3Q9H361 631 aaKnown RBP6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 MOSPD1Q9UJG1 213 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 PNPLA7Q6ZV29 1317 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 LAMB2P55268 1798 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 A0A0U1RQK1 487 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF320A2RRD8 509 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 SMIM23A6NLE4 172 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 FBP2O00757 339 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 BUB1O43683 1085 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 LRRN2O75325 713 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 PALMO75781 387 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 KRT36O76013 467 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 HDCP19113 662 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 RABIFP47224 123 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 POLGP54098 1239 aaPredicted RBP6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 CTSWP56202 376 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 DUSP4Q13115 394 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 C10orf76Q5T2E6 689 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF772Q68DY9 489 aaPredicted RBP6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 CGB2Q6NT52 195 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 PATL1Q86TB9 770 aaKnown RBP6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 SATL1Q86VE3 508 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 CROCCP3Q8IVE0 287 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 ANKRD13CQ8N6S4 541 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 ZBTB44Q8NCP5 570 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 CKAP2Q8WWK9 683 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 DACH2Q96NX9 599 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 TMEM109Q9BVC6 243 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 TPK1Q9H3S4 243 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 PDE7BQ9NP56 450 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 DKK3Q9UBP4 350 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 AP4E1Q9UPM8 1137 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF281Q9Y2X9 895 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 PCDHA1Q9Y5I3 950 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 SNX8Q9Y5X2 465 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 ARAP2Q8WZ64 1704 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 STK36Q9NRP7 1315 aa6.93□□□□□ -1.3
TSPAN3-209ENST00000560715 MYH1P12882 1939 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 HGSO14964 777 aaPredicted RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 KIAA0355O15063 1070 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 RANBP6O60518 1105 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 PSMG1O95456 288 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 OXSR1O95747 527 aaPredicted RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 SNRNP70P08621 437 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 T-ENOLP0DO92 83 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 ACADMP11310 421 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 CYP2A6P11509 494 aaPredicted RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 KLK7P49862 253 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 BCAR1P56945 870 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 HTRA4P83105 476 aaPredicted RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 DMPKQ09013 629 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 TBL3Q12788 808 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 SPDYAQ5MJ70 313 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 DEPDC1Q5TB30 811 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 ZNF658Q5TYW1 1059 aaPredicted RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 DENND2CQ68D51 928 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 CXorf67Q86X51 503 aaPredicted RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 ACTRT1Q8TDG2 376 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 FMO2Q99518 471 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 WDR18Q9BV38 432 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 ZMYND12Q9H0C1 365 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 SYNCQ9H7C4 482 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 TRMT112Q9UI30 125 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 CNOT7Q9UIV1 285 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 CPSF3Q9UKF6 684 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 EXOC7Q9UPT5 735 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 CARD8Q9Y2G2 431 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 HBS1LQ9Y450 684 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 AKAP11Q9UKA4 1901 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 MYH14Q7Z406 1995 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 BCORQ6W2J9 1755 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 A0A088AWK7 358 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 CCDC188H7C350 402 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 VILLO15195 856 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 RNF113AO15541 343 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 SMPD2O60906 423 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 RNASEH1O60930 286 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 HSPD1P10809 573 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 SYN1P17600 705 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 PTPN4P29074 926 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 DNA2P51530 1060 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 ARFIP1P53367 373 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 MANFP55145 182 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 UGT8Q16880 541 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 BTBD16Q32M84 506 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 ACSBG2Q5FVE4 666 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 INTS5Q6P9B9 1019 aaKnown RBP6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 KLHDC10Q6PID8 442 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 ACAD11Q709F0 780 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 SLFN11Q7Z7L1 901 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 GALNT4Q8N4A0 578 aa6.92□□□□□ -1.3
TSPAN3-209ENST00000560715 GPR150Q8NGU9 434 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms