RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 VPS28Q9UK41 221 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 APOBEC2Q9Y235 224 aaKnown RBP14.51□□□□□ -0.09
TPM1-223ENST00000560445 C1QTNF3-AMACRE9PGA6 284 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 GIPC1O14908 333 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 YKT6O15498 198 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 FLRT2O43155 660 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 SLC7A4O43246 635 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 GRAP2O75791 330 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 RNASEH2AO75792 299 aaKnown RBP14.5□□□□□ -0.09
TPM1-223ENST00000560445 FSBPO95073 299 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 PDGFRAP16234 1089 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 MAOBP27338 520 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 ACSL1P33121 698 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 GABRB2P47870 512 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 SULT1E1P49888 294 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 C21orf59P57076 290 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 DEUP1Q05D60 604 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 AUHQ13825 339 aaKnown RBP14.5□□□□□ -0.09
TPM1-223ENST00000560445 TAF5Q15542 800 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 SLC25A52Q3SY17 297 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 FSCBQ5H9T9 825 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 C6orf118Q5T5N4 469 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 KIAA0895LQ68EN5 471 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 FBXL22Q6P050 247 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 SETD3Q86TU7 594 aaPredicted RBP14.5□□□□□ -0.09
TPM1-223ENST00000560445 MRGPRX3Q96LB0 322 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 ACE2Q9BYF1 805 aaPredicted RBP14.5□□□□□ -0.09
TPM1-223ENST00000560445 MUC3BQ9H195 1237 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 KDM4CQ9H3R0 1056 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 GAREM1Q9H706 876 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 INTS6Q9UL03 887 aaKnown RBP14.5□□□□□ -0.09
TPM1-223ENST00000560445 NEUROG3Q9Y4Z2 214 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 FHOD1Q9Y613 1164 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 PCNX2A6NKB5 2137 aa14.5□□□□□ -0.09
TPM1-223ENST00000560445 ADAMTS9Q9P2N4 1935 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 PAGE1O75459 146 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 CCDC172P0C7W6 258 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 CD59P13987 128 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 GOT1P17174 413 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 SLC8A1P32418 973 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 ETFBP38117 255 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 CXCR3P49682 368 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 CCR5P51681 352 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 CLCN6P51797 869 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 RACK1P63244 317 aaKnown RBP14.49□□□□□ -0.09
TPM1-223ENST00000560445 APBA1Q02410 837 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 STX1AQ16623 288 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 ARL13BQ3SXY8 428 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 HSP90AA4PQ58FG1 418 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 C9orf64Q5T6V5 341 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 ZNF783Q6ZMS7 281 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 MMAAQ8IVH4 418 aaKnown RBP14.49□□□□□ -0.09
TPM1-223ENST00000560445 IGSF8Q969P0 613 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 BIRC7Q96CA5 298 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 MYO19Q96H55 970 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 C1orf74Q96LT6 269 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 NPY6RQ99463 290 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 NAA15Q9BXJ9 866 aaKnown RBP14.49□□□□□ -0.09
TPM1-223ENST00000560445 ADAM33Q9BZ11 813 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 NAT10Q9H0A0 1025 aaKnown RBP14.49□□□□□ -0.09
TPM1-223ENST00000560445 TKTL2Q9H0I9 626 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 C6orf106Q9H6K1 298 aaPredicted RBP14.49□□□□□ -0.09
TPM1-223ENST00000560445 RETREG1Q9H6L5 497 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 SAMSN1Q9NSI8 373 aaKnown RBP14.49□□□□□ -0.09
TPM1-223ENST00000560445 XPO7Q9UIA9 1087 aaKnown RBP14.49□□□□□ -0.09
TPM1-223ENST00000560445 VANGL2Q9ULK5 521 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 TBC1D30Q9Y2I9 924 aa14.49□□□□□ -0.09
TPM1-223ENST00000560445 MAP1BP46821 2468 aaKnown RBP14.48□□□□□ -0.09
TPM1-223ENST00000560445 TTC34A8MYJ7 566 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 MAGEC1O60732 1142 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 GJB3O75712 270 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 IL1BP01584 269 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 RHOCP08134 193 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 ZNF18P17022 549 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 STAT1P42224 750 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 PSMD8P48556 350 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 CCT8P50990 548 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 RNASE9P60153 205 aaKnown RBP14.48□□□□□ -0.09
TPM1-223ENST00000560445 CDR2Q01850 454 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 MYL5Q02045 173 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 TRIP6Q15654 476 aaKnown RBP14.48□□□□□ -0.09
TPM1-223ENST00000560445 HLA-BQ31612 363 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 C5orf22Q49AR2 442 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 ACCSLQ4AC99 568 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 CDKAL1Q5VV42 579 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 PPP1R2P3Q6NXS1 205 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 UNQ6494/PRO21346Q6UXR6 183 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 MMS22LQ6ZRQ5 1243 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 APCDD1Q8J025 514 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 OXR1Q8N573 874 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 NT5C3BQ969T7 300 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 PCMTD1Q96MG8 357 aaPredicted RBP14.48□□□□□ -0.09
TPM1-223ENST00000560445 HAPLN3Q96S86 360 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 FEM1AQ9BSK4 669 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 SIK2Q9H0K1 926 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 TM9SF3Q9HD45 589 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 FSCN3Q9NQT6 498 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 TM7SF3Q9NS93 570 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 ARHGEF38Q9NXL2 777 aa14.48□□□□□ -0.09
TPM1-223ENST00000560445 TAB2Q9NYJ8 693 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms