RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SIGLEC6O43699 453 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 BEST1O76090 585 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 KLKB1P03952 638 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 PTMAP06454 111 aaKnown RBP9.65□□□□□ -0.86
SMAD3-215ENST00000560424 ALPPL2P10696 532 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 SFTPCP11686 197 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 MYF5P13349 255 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 ADORA2BP29275 332 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 MTIF2P46199 727 aaKnown RBP9.65□□□□□ -0.86
SMAD3-215ENST00000560424 MYL6P60660 151 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 PDE4CQ08493 712 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 ZNF211Q13398 564 aaPredicted RBP9.65□□□□□ -0.86
SMAD3-215ENST00000560424 ARID5BQ14865 1188 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 SNRNP35Q16560 246 aaKnown RBP9.65□□□□□ -0.86
SMAD3-215ENST00000560424 PROX2Q3B8N5 592 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 VWA3BQ502W6 1294 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 HSP90AA4PQ58FG1 418 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 TMEM215Q68D42 235 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 FOXR1Q6PIV2 292 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 XKR5Q6UX68 686 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 SND1Q7KZF4 910 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMAD3-215ENST00000560424 CCDC186Q7Z3E2 898 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 TMC6Q7Z403 805 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 DRC7Q8IY82 874 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 CPXM2Q8N436 756 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 ZMIZ2Q8NF64 920 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 NDST4Q9H3R1 872 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 NMUR1Q9HB89 426 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 CSNK1G1Q9HCP0 422 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 FAM49BQ9NUQ9 324 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 ABCB8Q9NUT2 735 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 GGA2Q9UJY4 613 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 AGO1Q9UL18 857 aaKnown RBP9.65□□□□□ -0.86
SMAD3-215ENST00000560424 CLEC4EQ9ULY5 219 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 ZKSCAN5Q9Y2L8 839 aa9.65□□□□□ -0.86
SMAD3-215ENST00000560424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.65□□□□□ -0.86
SMAD3-215ENST00000560424 DOPEY2Q9Y3R5 2298 aa9.65□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3DA0A087WVF3 549 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3IA0A087WXS9 549 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3EA0A087X179 549 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3KA0A087X1G2 549 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 A0A1W2PR77 199 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 GTPBP10A4D1E9 387 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3FA6NER0 549 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3LB9A6J9 549 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 PMM2O15305 246 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 OPA1O60313 960 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 STAU1O95793 577 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 AFPP02771 609 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 DLDP09622 509 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3HP0C7X1 549 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 EPB41P11171 864 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 PABPC1P11940 636 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 FECHP22830 423 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 HLA-FP30511 346 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 PSMC2P35998 433 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 HARS2P49590 506 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 DUSP3P51452 185 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 CCR5P51681 352 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 INHBCP55103 352 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 NFKB2Q00653 900 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 UBAP2LQ14157 1087 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 STAT4Q14765 748 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 FKBP15Q5T1M5 1219 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 MBLAC2Q68D91 279 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3GQ6DHY5 549 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3CQ6IPX1 549 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 NAPEPLDQ6IQ20 393 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 USP53Q70EK8 1073 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 GPRIN1Q7Z2K8 1008 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 PRPF39Q86UA1 669 aaKnown RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 ZSCAN30Q86W11 494 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 LRRC8AQ8IWT6 810 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TBC1D3Q8IZP1 549 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 ARL14Q8N4G2 192 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 MFSD2AQ8NA29 543 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 RBBP8NLQ8NC74 664 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 CCDC112Q8NEF3 446 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 OR14C36Q8NHC7 312 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 MAPK15Q8TD08 544 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 P2RY11Q96G91 374 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 EDEM3Q9BZQ6 932 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 DNAI2Q9GZS0 605 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 OSBPL2Q9H1P3 480 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 RSPH9Q9H1X1 276 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 VPS16Q9H269 839 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 NEUROG2Q9H2A3 272 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 EBF2Q9HAK2 575 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 ASCL3Q9NQ33 180 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 TAB2Q9NYJ8 693 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 ARMCX3Q9UH62 379 aaPredicted RBP9.64□□□□□ -0.87
SMAD3-215ENST00000560424 FZD4Q9ULV1 537 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 SATB2Q9UPW6 733 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 FRMD4BQ9Y2L6 1034 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 DAAM1Q9Y4D1 1078 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 PAXBP1Q9Y5B6 917 aa9.64□□□□□ -0.87
SMAD3-215ENST00000560424 A0A1W2PQJ5 194 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 SLC12A8A0AV02 714 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 MID1O15344 667 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 P4HA2O15460 535 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms