RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 NUDT1P36639 197 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 RPS24P62847 133 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 NFKB2Q00653 900 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 CENPEQ02224 2701 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 STAT4Q14765 748 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 ISXQ2M1V0 245 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 FSCBQ5H9T9 825 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 PITRM1Q5JRX3 1037 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 ARHGAP17Q68EM7 881 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 NADSYN1Q6IA69 706 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 CCDC81Q6ZN84 652 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 HSCBQ8IWL3 235 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 RP1L1Q8IWN7 2480 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 ZNF557Q8N988 423 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 ANKRD52Q8NB46 1076 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 HJURPQ8NCD3 748 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 KLHDC7BQ96G42 594 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 APOLD1Q96LR9 279 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 IMPG2Q9BZV3 1241 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 KLHL11Q9NVR0 708 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 TJP2Q9UDY2 1190 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 ITPR2Q14571 2701 aa13.26□□□□□ -0.29
RABGGTA-213ENST00000560127 PMS2P1A4D2B8 440 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 PLRG1O43660 514 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 ACSL4O60488 711 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 NR3C1P04150 777 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 VAV1P15498 845 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 RBMS1P29558 406 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 GCLMP48507 274 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 SLC11A2P49281 568 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 RAD23BP54727 409 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 PPP3CAQ08209 521 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 ADIGQ0VDE8 80 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 CLN3Q13286 438 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 ARL13BQ3SXY8 428 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 LINC00303Q3SY05 128 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 POM121L1PQ3SYA9 428 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 C6orf132Q5T0Z8 1188 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 TRIM69Q86WT6 500 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 CARNMT1Q8N4J0 409 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 IQUBQ8NA54 791 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 TATDN2Q93075 761 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 ATXN7L3BQ96GX2 97 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 RPL10LQ96L21 214 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 ABCG4Q9H172 646 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 KCTD10Q9H3F6 313 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 KDM4CQ9H3R0 1056 aa13.25□□□□□ -0.29
RABGGTA-213ENST00000560127 PVALEFA0A1B0GWK0 134 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 CDRT15L2A8MXV6 281 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 PRAMEF26H0Y7S4 382 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 XPO1O14980 1071 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 SLC7A4O43246 635 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 EFSO43281 561 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 PIAS2O75928 621 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 NTRK1P04629 796 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 TRIM49P0CI25 452 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 TRIM49CP0CI26 452 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 THEGLP0DJG4 465 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 TGM2P21980 687 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 STK19P49842 368 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 VAMP7P51809 220 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 ECT2LQ008S8 904 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 KCNMA1Q12791 1236 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 CUL4BQ13620 913 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 ELAVL3Q14576 367 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 KMT5BQ4FZB7 885 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 CEP135Q66GS9 1140 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 MSANTD2Q6P1R3 559 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 UNC45BQ8IWX7 931 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 TMEM145Q8NBT3 493 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 KIAA0895Q8NCT3 520 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 IFI44Q8TCB0 444 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 MAPK15Q8TD08 544 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 LRRC4Q9HBW1 653 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 CISHQ9NSE2 258 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 ABCC13Q9NSE7 274 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 STARD5Q9NSY2 213 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 NLGN3Q9NZ94 848 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 SARDHQ9UL12 918 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 PCDHGA8Q9Y5G5 932 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 ENTPD2Q9Y5L3 495 aa13.24□□□□□ -0.29
RABGGTA-213ENST00000560127 ITGB6P18564 788 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 PDCP20941 246 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 SLC8A3P57103 927 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 STK4Q13043 487 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 CDH18Q13634 790 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 GOLGA7BQ2TAP0 167 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 ZSCAN23Q3MJ62 389 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 SETMARQ53H47 684 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 AGBL4Q5VU57 503 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 NUGGCQ68CJ6 796 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 ZNF574Q6ZN55 896 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 ATG14Q6ZNE5 492 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 APCDD1Q8J025 514 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 LINC00301Q8NCQ3 95 aa13.23□□□□□ -0.29
RABGGTA-213ENST00000560127 AZIN2Q96A70 460 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms