RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 TRIB2Q92519 343 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 DPF3Q92784 378 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 LPPQ93052 612 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 UTP4Q969X6 686 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 PTCD3Q96EY7 689 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 THOC1Q96FV9 657 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 NSL1Q96IY1 281 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TEKT5Q96M29 485 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 KCNK16Q96T55 309 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 RBBP8Q99708 897 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 GORASP1Q9BQQ3 440 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 IL22Q9GZX6 179 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 C12orf65Q9H3J6 166 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 SMOC2Q9H3U7 446 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 AGO3Q9H9G7 860 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 EBF2Q9HAK2 575 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 CD248Q9HCU0 757 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 ANLNQ9NQW6 1124 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TMPRSS4Q9NRS4 437 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 ABCC13Q9NSE7 274 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TMEM30AQ9NV96 361 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 THAP1Q9NVV9 213 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 NOP53Q9NZM5 478 aaKnown RBP8.28□□□□□ -1.08
SMAD3-212ENST00000559937 COX16Q9P0S2 106 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 ZFATQ9P243 1243 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 TXNDC16Q9P2K2 825 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 OR12D3Q9UGF7 316 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 HAO1Q9UJM8 370 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 MID2Q9UJV3 735 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 DCTN4Q9UJW0 460 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 PCDHB8Q9UN66 801 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 SOX13Q9UN79 622 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 SORCS3Q9UPU3 1222 aa8.28□□□□□ -1.08
SMAD3-212ENST00000559937 VWA8A3KMH1 1905 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 A0A0G2JND7 137 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 I6L893 689 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 TIMM44O43615 452 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 H2AFYO75367 372 aaKnown RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ANXA9O76027 345 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 LRIG2O94898 1065 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ALDH1A1P00352 501 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 PGK1P00558 417 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 PROCP04070 461 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ALDOAP04075 364 aaKnown RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 SERPINE1P05121 402 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 APOA4P06727 396 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ITGA2BP08514 1039 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 CTSHP09668 335 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 MYL2P10916 166 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 MYL4P12829 197 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 BDNFP23560 247 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 IGFBP6P24592 240 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 CTGFP29279 349 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 EPHB2P29323 1055 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 POLD2P49005 469 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 LIMK2P53671 638 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 CACNA2D1P54289 1103 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ZBTB16Q05516 673 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 CDH17Q12864 832 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 OVGP1Q12889 678 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 LPIN1Q14693 890 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 PPP2R5DQ14738 602 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 CHI3L2Q15782 390 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ANKRD20A4Q4UJ75 823 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 CCSAPQ6IQ19 270 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 TIGD7Q6NT04 549 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 MSANTD2Q6P1R3 559 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ZNF598Q86UK7 904 aaKnown RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ARHGAP24Q8N264 748 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 KIF2BQ8N4N8 673 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 NPWQ8N729 165 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 OR52K1Q8NGK4 314 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ZSCAN18Q8TBC5 510 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 PTCD2Q8WV60 388 aaKnown RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 FATE1Q969F0 183 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ZNF669Q96BR6 464 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 TBC1D31Q96DN5 1066 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 TBC1D10AQ9BXI6 508 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 SLC13A1Q9BZW2 595 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 TKTL2Q9H0I9 626 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 MMADHCQ9H3L0 296 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 CATSPERBQ9H7T0 1116 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 ALG13Q9NP73 1137 aaKnown RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 EMCNQ9ULC0 261 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 VANGL2Q9ULK5 521 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 TRIM33Q9UPN9 1127 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 TIMM13Q9Y5L4 95 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-212ENST00000559937 RPS6KL1Q9Y6S9 549 aa8.27□□□□□ -1.09
SMAD3-212ENST00000559937 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ZCWPW2A0A1B0GU75 182 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ARHGAP42A6NI28 874 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 KCNK1O00180 336 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 FCHO1O14526 889 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 TNFRSF10BO14763 440 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 TPP1O14773 563 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 ZBTB24O43167 697 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-212ENST00000559937 MGEA5O60502 916 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 B3GAT3O94766 335 aa8.26□□□□□ -1.09
SMAD3-212ENST00000559937 EOMESO95936 686 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms