RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CCL26Q9Y258 94 aa5.42□□□□□ -1.54
SPG11-220ENST00000559933 HIF3AQ9Y2N7 669 aa5.42□□□□□ -1.54
SPG11-220ENST00000559933 MFHAS1Q9Y4C4 1052 aa5.42□□□□□ -1.54
SPG11-220ENST00000559933 BRWD1Q9NSI6 2320 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 HELZP42694 1942 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 DENND4CQ5VZ89 1909 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 A0A1W2PPC1 479 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 TCRBV7S2A1N4TA0A589 114 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 FAM72CH0Y354 149 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 TRDMT1O14717 391 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 IRAK2O43187 625 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 ZNF500O60304 480 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 TRUB2O95900 331 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 OAS1P00973 400 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 IGLV3-25P01717 112 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 SSTR4P31391 388 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 CASQ1P31415 396 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 RDXP35241 583 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 LTBRP36941 435 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 PTPN9P43378 593 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 SGSHP51688 502 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 HADHBP55084 474 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 AMPD2Q01433 879 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 ADCY2Q08462 1091 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 ADAM15Q13444 863 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 TCEAL1Q15170 157 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 SLC25A52Q3SY17 297 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 PABPC1LQ4VXU2 614 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 HABP4Q5JVS0 413 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 HP1BP3Q5SSJ5 553 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 GPR158Q5T848 1215 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 FAM72AQ5TYM5 149 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 KAZNQ674X7 775 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 FAM72DQ6L9T8 149 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 PPP1R2P3Q6NXS1 205 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 ANKRD54Q6NXT1 300 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 BEND4Q6ZU67 534 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 PDZD4Q76G19 769 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 B4GALNT4Q76KP1 1039 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 GET4Q7L5D6 327 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 PEX26Q7Z412 305 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 VN1R5Q7Z5H4 357 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 ADAT2Q7Z6V5 191 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 ITIH5Q86UX2 942 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 FAM72BQ86X60 149 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 CIR1Q86X95 450 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 ZDHHC17Q8IUH5 632 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 FAM20CQ8IXL6 584 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 SCML4Q8N228 414 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 EFHBQ8N7U6 833 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 NIPA2Q8N8Q9 360 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 MAB21L3Q8N8X9 362 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 C12orf50Q8NA57 414 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 GIMAP7Q8NHV1 300 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 RAPGEF5Q92565 580 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 GOLGA1Q92805 767 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 HAUS1Q96CS2 278 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 RSPRY1Q96DX4 576 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 TRMT2BQ96GJ1 504 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 HES6Q96HZ4 224 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 MS4A14Q96JA4 679 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 CAPZA3Q96KX2 299 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 FCRL2Q96LA5 508 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 SLITRK1Q96PX8 696 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 CDX2Q99626 313 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 NAPGQ99747 312 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 FAM118BQ9BPY3 351 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 CNPY3Q9BT09 278 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 SMOC2Q9H3U7 446 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 SLITRK6Q9H5Y7 841 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 SOX17Q9H6I2 414 aaPredicted RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 C7orf69Q9H7B7 122 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 SFXN1Q9H9B4 322 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 LIN7BQ9HAP6 207 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 PIDD1Q9HB75 910 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 ZFYVE1Q9HBF4 777 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 TLR8Q9NR97 1041 aaKnown RBP5.41□□□□□ -1.54
SPG11-220ENST00000559933 LATS2Q9NRM7 1088 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 ASNSD1Q9NWL6 643 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 TRPM5Q9NZQ8 1165 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 MARCH2Q9P0N8 246 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 HSFX1Q9UBD0 423 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 IP6K2Q9UHH9 426 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 USP18Q9UMW8 372 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 CPQQ9Y646 472 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 DENND4AQ7Z401 1863 aa5.41□□□□□ -1.54
SPG11-220ENST00000559933 COL4A3Q01955 1670 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 LRRD1A4D1F6 860 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 MEGF11A6BM72 1044 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 GOLGA6L9A6NEM1 432 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 C3orf70A6NLC5 250 aaPredicted RBP5.4□□□□□ -1.54
SPG11-220ENST00000559933 KCNK3O14649 394 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 TM4SF5O14894 197 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 GREM1O60565 184 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 KLKB1P03952 638 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 GLI1P08151 1106 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 PYGMP11217 842 aa5.4□□□□□ -1.54
SPG11-220ENST00000559933 MBL2P11226 248 aaPredicted RBP5.4□□□□□ -1.54
SPG11-220ENST00000559933 ESRRAP11474 423 aaPredicted RBP5.4□□□□□ -1.54
SPG11-220ENST00000559933 KRT10P13645 584 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms