RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TCAF2A6NFQ2 919 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 TSPAN3O60637 253 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 CLDN11O75508 207 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 KRT14P02533 472 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 GARSP41250 739 aaKnown RBP12.51□□□□□ -0.41
HERC1-205ENST00000559886 DRG2P55039 364 aaKnown RBP12.51□□□□□ -0.41
HERC1-205ENST00000559886 PPIDQ08752 370 aaKnown RBP12.51□□□□□ -0.41
HERC1-205ENST00000559886 GET4Q7L5D6 327 aaPredicted RBP12.51□□□□□ -0.41
HERC1-205ENST00000559886 IFT20Q8IY31 132 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 CELF5Q8N6W0 485 aaKnown RBP12.51□□□□□ -0.41
HERC1-205ENST00000559886 GLIS1Q8NBF1 620 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 LRRN4Q8WUT4 740 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 MSLNLQ96KJ4 702 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 GAS2L1Q99501 681 aaPredicted RBP12.51□□□□□ -0.41
HERC1-205ENST00000559886 SLC39A8Q9C0K1 460 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 PCDH9Q9HC56 1237 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 RAB21Q9UL25 225 aa12.51□□□□□ -0.41
HERC1-205ENST00000559886 KCNN4O15554 427 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 OR1E1P30953 314 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 ZNF33AQ06730 810 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 LRRC49Q8IUZ0 686 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 KIAA1958Q8N8K9 716 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 CCDC89Q8N998 374 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 HJURPQ8NCD3 748 aaPredicted RBP12.5□□□□□ -0.41
HERC1-205ENST00000559886 CCNYQ8ND76 341 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 TMA16Q96EY4 203 aaKnown RBP12.5□□□□□ -0.41
HERC1-205ENST00000559886 FAM161BQ96MY7 647 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 ASB16Q96NS5 453 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 TSGA13Q96PP4 275 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 ESYT3A0FGR9 886 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 ZNF189O75820 626 aaPredicted RBP12.5□□□□□ -0.41
HERC1-205ENST00000559886 IFNB1P01574 187 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 ETS1P14921 441 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 VAV1P15498 845 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 AP1B1Q10567 949 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 TRADDQ15628 312 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 TRIP13Q15645 432 aaPredicted RBP12.5□□□□□ -0.41
HERC1-205ENST00000559886 FAM78AQ5JUQ0 283 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 HEATR6Q6AI08 1181 aaKnown RBP12.5□□□□□ -0.41
HERC1-205ENST00000559886 EP400NLQ6ZTU2 488 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 PRUNE1Q86TP1 453 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 TDRD5Q8NAT2 981 aaKnown RBP12.5□□□□□ -0.41
HERC1-205ENST00000559886 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 HTR3CQ8WXA8 447 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 SMARCD2Q92925 531 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 RIPOR3Q96MK2 946 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 TRIM31Q9BZY9 425 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 TRPV4Q9HBA0 871 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 TBC1D14Q9P2M4 693 aa12.5□□□□□ -0.41
HERC1-205ENST00000559886 DFFAO00273 331 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 ZSCAN5DPP0CG00 497 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 MCM3P25205 808 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 IVDP26440 423 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 TNFRSF8P28908 595 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 RPL21P46778 160 aaKnown RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 YBEYP58557 167 aaPredicted RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 VSNL1P62760 191 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 PARP15Q460N3 678 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 MPP7Q5T2T1 576 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 CASKIN2Q8WXE0 1202 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 P2RY11Q96G91 374 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 LRRC3BQ96PB8 259 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 DPH5Q9H2P9 285 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 ASIC3Q9UHC3 531 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 CDH7Q9ULB5 785 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 TBC1D30Q9Y2I9 924 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 XIRP2A4UGR9 3374 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 KIF26AQ9ULI4 1882 aaPredicted RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 TYW5A2RUC4 315 aaKnown RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 RASA4BC9J798 803 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 RASA4O43374 803 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 RAMP2O60895 175 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 TBL1XO60907 577 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 CCNCP24863 283 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 MTHFRP42898 656 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 PAPOLAP51003 745 aaKnown RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 NRLP54845 237 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 ZNF177Q13360 481 aaPredicted RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 POLD3Q15054 466 aaPredicted RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 MPPE1Q53F39 396 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 SETD3Q86TU7 594 aaPredicted RBP12.49□□□□□ -0.41
HERC1-205ENST00000559886 ATPAF2Q8N5M1 289 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 OTUB2Q96DC9 234 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 RSPRY1Q96DX4 576 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 HMCESQ96FZ2 354 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 FERMT1Q9BQL6 677 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 SNX24Q9Y343 169 aa12.49□□□□□ -0.41
HERC1-205ENST00000559886 C5orf60A6NFR6 353 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 ARHGAP42A6NI28 874 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 MTSS1O43312 755 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 MAFKO60675 156 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 GCATO75600 419 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 RPL22P35268 128 aaKnown RBP12.48□□□□□ -0.41
HERC1-205ENST00000559886 ADCY8P40145 1251 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 VIPR2P41587 438 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 CUL1Q13616 776 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 P3H1Q32P28 736 aa12.48□□□□□ -0.41
HERC1-205ENST00000559886 C6orf118Q5T5N4 469 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms