RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 COG7P83436 770 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 PDE4CQ08493 712 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 GOLGA8FQ08AF8 430 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 GOLGA8DPQ0D2H9 430 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 SCAPQ12770 1279 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 CAMK2GQ13555 558 aaPredicted RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 COL9A2Q14055 689 aaPredicted RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 ZNF423Q2M1K9 1284 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 HLA-BQ31612 363 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 EDRF1Q3B7T1 1238 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 DCAF12L1Q5VU92 463 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 KRT39Q6A163 491 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 LRSAM1Q6UWE0 723 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 CCNI2Q6ZMN8 369 aaPredicted RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 ANKS1BQ7Z6G8 1248 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ADIPOR2Q86V24 386 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 PROSER1Q86XN7 944 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 CACUL1Q86Y37 369 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 MARCH9Q86YJ5 346 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 RGL4Q8IZJ4 473 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 HDDC3Q8N4P3 179 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ZNF366Q8N895 744 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.05□□□□□ -1.44
USP3-215ENST00000559771 ANKRD52Q8NB46 1076 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 FBXL13Q8NEE6 735 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 CADM4Q8NFZ8 388 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 NUDT8Q8WV74 236 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 TFAP2BQ92481 460 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 MYEOVQ96EZ4 313 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 MYO19Q96H55 970 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 FAXDC2Q96IV6 333 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 HEXIM2Q96MH2 286 aaKnown RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 SLC2A11Q9BYW1 496 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ULBP1Q9BZM6 244 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 MTG2Q9H4K7 406 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 C6orf106Q9H6K1 298 aaPredicted RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 RAB20Q9NX57 234 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 SFMBT1Q9UHJ3 866 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 EIF2B4Q9UI10 523 aaKnown RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 BTBD3Q9Y2F9 522 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ZNF510Q9Y2H8 683 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 COQ4Q9Y3A0 265 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ATP6V1DQ9Y5K8 247 aa6.05□□□□□ -1.44
USP3-215ENST00000559771 ANKRD11Q6UB99 2663 aaPredicted RBP6.05□□□□□ -1.44
USP3-215ENST00000559771 BPTFQ12830 3046 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 GOLGA6L7A0A1B0GV03 622 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 A0A1B0GVT2 93 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 A0A1W2PQ27 194 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 A0A1W2PQ64 194 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 O00370 1275 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 PRRG2O14669 202 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 XPO1O14980 1071 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 NPC1O15118 1278 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 BCAT2O15382 392 aaPredicted RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 MSI1O43347 362 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 TSPAN3O60637 253 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 ZNF202O95125 648 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 KIF20AO95235 890 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 MBD3O95983 291 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 CALCAP01258 141 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 IGLV3-27P01718 113 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 FYNP06241 537 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 EPHX1P07099 455 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 ATXN1LP0C7T5 689 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 ZNF883P0CG24 379 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 KRT13P13646 458 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 SLC6A4P31645 630 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 PRCPP42785 496 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 CSNK1EP49674 416 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 MXI1P50539 228 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 RPS14P62263 151 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 HNRNPDQ14103 355 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 STARD3Q14849 445 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 EIF4HQ15056 248 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 GOLGA7BQ2TAP0 167 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 FAM133BQ5BKY9 247 aaKnown RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 WDR45BQ5MNZ6 344 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 SYCP2LQ5T4T6 812 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 ZNF648Q5T619 568 aaPredicted RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 BSPRYQ5W0U4 402 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 NADSYN1Q6IA69 706 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 IGF2-ASQ6U949 168 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 LAYNQ6UX15 382 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 TADA2BQ86TJ2 420 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 FAM124AQ86V42 546 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 FMNL3Q8IVF7 1028 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 SCML4Q8N228 414 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 OR2T3Q8NH03 318 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 LMO3Q8TAP4 145 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 UBA3Q8TBC4 463 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 CLEC4CQ8WTT0 213 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 DDI1Q8WTU0 396 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 CYB5D2Q8WUJ1 264 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 KCTD13Q8WZ19 329 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 EDEM1Q92611 657 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 PRCCQ92733 491 aaPredicted RBP6.04□□□□□ -1.44
USP3-215ENST00000559771 SLC35C1Q96A29 364 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 PLD4Q96BZ4 506 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 SIPA1Q96FS4 1042 aa6.04□□□□□ -1.44
USP3-215ENST00000559771 SPATA32Q96LK8 384 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms