RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 RWDD4Q6NW29 188 aaKnown RBP11.2□□□□□ -0.62
TPM1-217ENST00000559108 AADACL2Q6P093 401 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 ARHGAP36Q6ZRI8 547 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 ZNF662Q6ZS27 426 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 NT5DC3Q86UY8 548 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 ARHGAP12Q8IWW6 846 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 MAML2Q8IZL2 1156 aaPredicted RBP11.2□□□□□ -0.62
TPM1-217ENST00000559108 C17orf53Q8N3J3 647 aaPredicted RBP11.2□□□□□ -0.62
TPM1-217ENST00000559108 CCDC33Q8N5R6 958 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 ALLCQ8N6M5 410 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 PQLC3Q8N755 202 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 ZNF366Q8N895 744 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 PCDH19Q8TAB3 1148 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 SHDQ96IW2 340 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 XPO6Q96QU8 1125 aaKnown RBP11.2□□□□□ -0.62
TPM1-217ENST00000559108 LRFN3Q9BTN0 628 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 CHRDQ9H2X0 955 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 LZTFL1Q9NQ48 299 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 TMEM248Q9NWD8 314 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 DNAI1Q9UI46 699 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 GUCA1BQ9UMX6 200 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 SIT1Q9Y3P8 196 aa11.2□□□□□ -0.62
TPM1-217ENST00000559108 TBC1D3BA6NDS4 549 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 WASH4PA8MWX3 477 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 EEF2KO00418 725 aaKnown RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 DCLK1O15075 740 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 DDX3YO15523 660 aaKnown RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 CLDN11O75508 207 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 ZMPSTE24O75844 475 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 CD160O95971 181 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 APODP05090 189 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 PTMAP06454 111 aaKnown RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 ERCC2P18074 760 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 DRD1P21728 446 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 PRKCHP24723 683 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 TIE1P35590 1138 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 IL12RB1P42701 662 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 PEX5P50542 639 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 CDH6P55285 790 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 TPI1P60174 286 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 ARF5P84085 180 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 SATB1Q01826 763 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 KIF5AQ12840 1032 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 GRSF1Q12849 480 aaKnown RBP eCLIP11.19□□□□□ -0.62
TPM1-217ENST00000559108 MTAPQ13126 283 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 MTA1Q13330 715 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 TAZQ16635 292 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 BOLA3Q53S33 107 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 TTC39BQ5VTQ0 682 aaPredicted RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 DCAF12L1Q5VU92 463 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 RNF219Q5W0B1 726 aaPredicted RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 AFMIDQ63HM1 303 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 MFSD7Q6UXD7 560 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 PSTKQ8IV42 348 aaKnown RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 RTL3Q8N8U3 475 aaKnown RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 IL17RCQ8NAC3 791 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 RPLP0P6Q8NHW5 317 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 LRRN4Q8WUT4 740 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 VOPP1Q96AW1 172 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 FAF2Q96CS3 445 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 CELF6Q96J87 481 aaKnown RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 EPAS1Q99814 870 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 FEM1AQ9BSK4 669 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 OSBPL6Q9BZF3 934 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 MFSD1Q9H3U5 465 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 LUC7LQ9NQ29 371 aaKnown RBP11.19□□□□□ -0.62
TPM1-217ENST00000559108 CACNA2D2Q9NY47 1150 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 STARD13Q9Y3M8 1113 aa11.19□□□□□ -0.62
TPM1-217ENST00000559108 FANCMQ8IYD8 2048 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 ANKRD36A6QL64 1941 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.18□□□□□ -0.62
TPM1-217ENST00000559108 PRR33A8MZF0 331 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 K7ERQ8 282 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 RNF103O00237 685 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 STK25O00506 426 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 FANCGO15287 622 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 SPOPO43791 374 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 MFSD11O43934 449 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 MAP3K6O95382 1288 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 MT-CO1P00395 513 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 KRT1P04264 644 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 RHOCP08134 193 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 TDGF1P13385 188 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 HLA-EP13747 358 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 VAV1P15498 845 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 KDELR1P24390 212 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 AVPR2P30518 371 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 OR1E1P30953 314 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 CTNNA1P35221 906 aaKnown RBP11.18□□□□□ -0.62
TPM1-217ENST00000559108 CLCN5P51795 746 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 PLK1P53350 603 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 GNA12Q03113 381 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 DMWDQ09019 674 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 ZNF177Q13360 481 aaPredicted RBP11.18□□□□□ -0.62
TPM1-217ENST00000559108 ENPP2Q13822 863 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 ZNF234Q14588 700 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 LRRC38Q5VT99 294 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 KIAA1211LQ6NV74 962 aa11.18□□□□□ -0.62
TPM1-217ENST00000559108 TMEM92Q6UXU6 159 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms