RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 SYBUQ9NX95 663 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ASIC5Q9NY37 505 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 KLQ9UEF7 1012 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 FBXO2Q9UK22 296 aaPredicted RBP1.81□□□□□ -2.12
USP3-209ENST00000558925 FBXO4Q9UKT5 387 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 SH2B3Q9UQQ2 575 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 SLC45A1Q9Y2W3 748 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 PIAS3Q9Y6X2 628 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 ITIH6Q6UXX5 1313 aa1.81□□□□□ -2.12
USP3-209ENST00000558925 CYP3A7-CYP3A51PA0A087WV96 503 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 A0A087X0M5 115 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 A0A1B0GX30 115 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 FSD2A1L4K1 749 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 NPIPB15A6NHN6 443 aaPredicted RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 SAC3D1A6NKF1 404 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 CLIC1O00299 241 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 QSOX1O00391 747 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 RRHO14718 337 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 PER2O15055 1255 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 SEPT4O43236 478 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 TGFB1I1O43294 461 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 HNRNPRO43390 633 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 ANP32CO43423 234 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 AHCYL1O43865 530 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 CNTN5O94779 1100 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 TJP3O95049 919 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 MLYCDO95822 493 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 TTLL1O95922 423 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 C1RP00736 705 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 TUBB4AP04350 444 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 URODP06132 367 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 ALDOCP09972 364 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 NPSP0C0P6 89 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 RFPL3SP0C7P2 107 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 NHLRC4P0CG21 123 aaPredicted RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 ATF7P17544 494 aaPredicted RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 NDUFB7P17568 137 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 IGFBP2P18065 325 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 EDN2P20800 178 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 MATN1P21941 496 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 MMP8P22894 467 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 SFPQP23246 707 aaKnown RBP eCLIP1.8□□□□□ -2.12
USP3-209ENST00000558925 CYP3A7P24462 503 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 PRKCHP24723 683 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 EPHA8P29322 1005 aaPredicted RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 TYK2P29597 1187 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 SLC8A1P32418 973 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 ICAM3P32942 547 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 HNF1BP35680 557 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 GRIA3P42263 894 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 PAFAH1B1P43034 410 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 POLD2P49005 469 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 CCT8P50990 548 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 EFNA5P52803 228 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 MVDP53602 400 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 MRPS35P82673 323 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 ARHGAP8P85298 464 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 ZBTB16Q05516 673 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 SLC14A1Q13336 389 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 BYSLQ13895 437 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 KCTD2Q14681 263 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 KPNB1Q14974 876 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 NAA25Q14CX7 972 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 PTPAQ15257 358 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 BAK1Q16611 211 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 MEA1Q16626 185 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 PRICKLE4Q2TBC4 344 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 GXYLT1Q4G148 440 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 PCID2Q5JVF3 399 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 LY6G5CQ5SRR4 150 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 SNX30Q5VWJ9 437 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 DENND1BQ6P3S1 775 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 MTFR2Q6P444 385 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 SLC39A5Q6ZMH5 540 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 C4orf50Q6ZRC1 276 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 NEK10Q6ZWH5 1172 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 B4GALNT4Q76KP1 1039 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 LRRC8DQ7L1W4 858 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 FASTKD5Q7L8L6 764 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 MDGA2Q7Z553 956 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 BCDIN3DQ7Z5W3 292 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 TFAP2DQ7Z6R9 452 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 ADGRG6Q86SQ4 1221 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 RAB11FIP4Q86YS3 637 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 RASAL3Q86YV0 1011 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 SRRM1Q8IYB3 904 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 LCORLQ8N3X6 602 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 PLD5Q8N7P1 536 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 EXD3Q8N9H8 876 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 USP38Q8NB14 1042 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 ABHD11Q8NFV4 315 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 METTL6Q8TCB7 284 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 RFFLQ8WZ73 363 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 IP6K1Q92551 441 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 KIF1BPQ96EK5 621 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 HS6ST2Q96MM7 605 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 ZNF778Q96MU6 729 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 PPP1R10Q96QC0 940 aaKnown RBP1.8□□□□□ -2.12
USP3-209ENST00000558925 HTATIP2Q9BUP3 242 aa1.8□□□□□ -2.12
USP3-209ENST00000558925 HEMGNQ9BXL5 484 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms