RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 FAM111AQ96PZ2 611 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC39A8Q9C0K1 460 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 NSRP1Q9H0G5 558 aaKnown RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 A6NNZ2 444 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 CCNB1P14635 433 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 SYN1P17600 705 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 OR1E1P30953 314 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 RPL34P49207 117 aaKnown RBP11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 RPL10AP62906 217 aaKnown RBP11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 IL9RQ01113 521 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 WASHC5Q12768 1159 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 XRCC4Q13426 336 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 TUBB8Q3ZCM7 444 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 IL31Q6EBC2 164 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 BHLHA9Q7RTU4 235 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 RASSF3Q86WH2 238 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 CNPY4Q8N129 248 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 SPPL2BQ8TCT7 592 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 LRRC8CQ8TDW0 803 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 APBB2Q92870 758 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 NT5C3BQ969T7 300 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 NTAN1Q96AB6 310 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 EXOC2Q96KP1 924 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 ZNF558Q96NG5 402 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 ACSS3Q9H6R3 686 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 SDR42E2A6NKP2 422 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 GCATO75600 419 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 FDFT1P37268 417 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 ALFQ53S48 1182 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 ITPRIPL1Q6GPH6 555 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 ARCQ7LC44 396 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 TMC7Q7Z402 723 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 CDKL2Q92772 493 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC9A7Q96T83 725 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 PLCD4Q9BRC7 762 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 FICDQ9BVA6 458 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 UNKQ9C0B0 810 aaKnown RBP11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 XAB2Q9HCS7 855 aaKnown RBP11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 IPO11Q9UI26 975 aaKnown RBP11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 C5orf60A6NFR6 353 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 HACD1B0YJ81 288 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 COPEO14579 308 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 KRT37O76014 449 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 FAM107AO95990 144 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 ADRA1DP25100 572 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 LBX1P52954 281 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 VEPH1Q14D04 833 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 TRABD2AQ86V40 505 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 ATP6V0D2Q8N8Y2 350 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 VPS11Q9H270 941 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 SMYD2Q9NRG4 433 aa11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 RCOR3Q9P2K3 495 aaPredicted RBP11.06□□□□□ -0.64
CSPG4P5-201ENST00000558731 KCNU1A8MYU2 1149 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 TNFRSF10BO14763 440 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 BUD23O43709 281 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SHOX2O60902 331 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 DGKIO75912 1065 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 GJB5O95377 273 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 GJA1P17302 382 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 PAPOLAP51003 745 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 COG7P83436 770 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 OVGP1Q12889 678 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 GPR17Q13304 367 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 LRRC26Q2I0M4 334 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 PARP6Q2NL67 630 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 LGSNQ5TDP6 509 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 ANKS4BQ8N8V4 417 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 TCP10LQ8TDR4 215 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 FUBP3Q96I24 572 aaKnown RBP eCLIP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 CYP2S1Q96SQ9 504 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SMOC2Q9H3U7 446 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 OGDHLQ9ULD0 1010 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC38A8A6NNN8 435 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SKAP2O75563 359 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 TOP3BO95985 862 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 PAX7P23759 505 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 GCKP35557 465 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 GMPRP36959 345 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 CHRNA4P43681 627 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 HSP90AA5PQ58FG0 334 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 FAM133BQ5BKY9 247 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 PIK3R6Q5UE93 754 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 MFSD5Q6N075 450 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SPATS2Q86XZ4 545 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 AGGF1Q8N302 714 aaeCLIP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 MFSD3Q96ES6 412 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 PKMYT1Q99640 499 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 EBNA1BP2Q99848 306 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 PITPNM3Q9BZ71 974 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLCO1B3Q9NPD5 702 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 TEX264Q9Y6I9 313 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 RANBP2P49792 3224 aaKnown RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 THSD7BQ9C0I4 1608 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 RTN3O95197 1032 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 ABHD2P08910 425 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 CSH1P0DML2 217 aa11.05□□□□□ -0.64
CSPG4P5-201ENST00000558731 CSH2P0DML3 217 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms