RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 H7C0C1 242 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 GFRA2O00451 464 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 LIASO43766 372 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 TBL1XO60907 577 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 LUC7L3O95232 432 aaKnown RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 RHOCP08134 193 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 RBP3P10745 1247 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 MCM3P25205 808 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 SLC6A4P31645 630 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 ATP5OP48047 213 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 VCPP55072 806 aaKnown RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 OTUD4Q01804 1114 aaKnown RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 GRM2Q14416 872 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 POLD3Q15054 466 aaPredicted RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 SMAD2Q15796 467 aaKnown RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 AADACL2Q6P093 401 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 RFWD3Q6PCD5 774 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 DARS2Q6PI48 645 aaKnown RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 C1orf228Q6PIY5 440 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 PARM1Q6UWI2 310 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 C14orf80Q86SX3 495 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 ADGRG2Q8IZP9 1017 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 ATPAF2Q8N5M1 289 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 FIBINQ8TAL6 211 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 ACTL9Q8TC94 416 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 SLCO2A1Q92959 643 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 IGSF8Q969P0 613 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 HDAC11Q96DB2 347 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 TSGA13Q96PP4 275 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 TRMT61BQ9BVS5 477 aaKnown RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 AP1M1Q9BXS5 423 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 RRAGDQ9NQL2 400 aaPredicted RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 DTLQ9NZJ0 730 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 THEGQ9P2T0 379 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 PCYOX1Q9UHG3 505 aa12.73□□□□□ -0.37
TPM1-209ENST00000558072 KIF26AQ9ULI4 1882 aaPredicted RBP12.73□□□□□ -0.37
TPM1-209ENST00000558072 TCF20Q9UGU0 1960 aaKnown RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 BCLAF3A2AJT9 711 aaKnown RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 ANHXE9PGG2 379 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 TRDMT1O14717 391 aaKnown RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 HOXC11O43248 304 aaPredicted RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 NEBLO76041 1014 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 ECEL1O95672 775 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 PENKP01210 267 aaPredicted RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 CCNCP24863 283 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 COILP38432 576 aaPredicted RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 SULT2A1Q06520 285 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 SLC20A2Q08357 652 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 GALNT2Q10471 571 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 RFTN1Q14699 578 aaPredicted RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 SLC45A4Q5BKX6 768 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 RNF43Q68DV7 783 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 HEATR6Q6AI08 1181 aaKnown RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 TANGO2Q6ICL3 276 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 GSTA5Q7RTV2 222 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 ADAT2Q7Z6V5 191 aaKnown RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 MFN1Q8IWA4 741 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 SUGP1Q8IWZ8 645 aaKnown RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 PRELID2Q8N945 189 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 CCDC89Q8N998 374 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 CCNYQ8ND76 341 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 SLC35B2Q8TB61 432 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 CASKIN2Q8WXE0 1202 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 RUBCNQ92622 972 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 FGF14Q92915 247 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 LRRC45Q96CN5 670 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 MYEOVQ96EZ4 313 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 ASIC4Q96FT7 647 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 P2RY11Q96G91 374 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 ZFYVE19Q96K21 471 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 CCDC114Q96M63 670 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 ZNF599Q96NL3 588 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 NECAB3Q96P71 396 aaPredicted RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
TPM1-209ENST00000558072 BBS2Q9BXC9 721 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 RAB17Q9H0T7 212 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 TRPV5Q9NQA5 729 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 MPP6Q9NZW5 540 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 AMACRQ9UHK6 382 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 C5orf42Q9H799 3197 aa12.72□□□□□ -0.37
TPM1-209ENST00000558072 PDE2AO00408 941 aaPredicted RBP12.71□□□□□ -0.37
TPM1-209ENST00000558072 TSPAN3O60637 253 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 ASGR2P07307 311 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 ADH5P11766 374 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 EIF2DP41214 584 aaKnown RBP12.71□□□□□ -0.37
TPM1-209ENST00000558072 GARSP41250 739 aaKnown RBP12.71□□□□□ -0.37
TPM1-209ENST00000558072 RENBPP51606 427 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 RPS24P62847 133 aaKnown RBP12.71□□□□□ -0.37
TPM1-209ENST00000558072 DR1Q01658 176 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 PFKPQ01813 784 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 GNA12Q03113 381 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 PPIDQ08752 370 aaKnown RBP12.71□□□□□ -0.37
TPM1-209ENST00000558072 DHCR24Q15392 516 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 SIX1Q15475 284 aaPredicted RBP12.71□□□□□ -0.37
TPM1-209ENST00000558072 EML3Q32P44 896 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 AFMIDQ63HM1 303 aa12.71□□□□□ -0.37
TPM1-209ENST00000558072 TRIM68Q6AZZ1 485 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms