RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 ARL6IP4Q66PJ3 421 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 ADGRG2Q8IZP9 1017 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 HTRA1Q92743 480 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 RNF170Q96K19 258 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 TNIP3Q96KP6 325 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 ZNF597Q96LX8 424 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 LHX5Q9H2C1 402 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 XPNPEP1Q9NQW7 623 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 TRAV20A0A0B4J274 112 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 ARHGEF37A1IGU5 675 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 FAM25AB3EWG3 89 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 FAM25CB3EWG5 89 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 FAM25GB3EWG6 89 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 E2F3O00716 465 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 CTNNA2P26232 953 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 SCRN3Q0VDG4 424 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 ZNF211Q13398 564 aaPredicted RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 NFIL3Q16649 462 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 AADACL2Q6P093 401 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 ZNF438Q7Z4V0 828 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 NT5DC4Q86YG4 428 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 RIOX2Q8IUF8 465 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 BBS7Q8IWZ6 715 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 SIX6OS1Q8N1H7 587 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 OR6P1Q8NGX9 317 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 TEX47Q8TBZ9 253 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 C9orf16Q9BUW7 83 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 DHX33Q9H6R0 707 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 NGRNQ9NPE2 291 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 CNOT11Q9UKZ1 510 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 PCDHB13Q9Y5F0 798 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 SNAP29O95721 258 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 MATN1P21941 496 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 PTX3P26022 381 aaPredicted RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 MAP4P27816 1152 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 LEPRP48357 1165 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 TFCP2Q12800 502 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 SIM2Q14190 667 aaPredicted RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 CEP55Q53EZ4 464 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 CSF3RQ99062 836 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 PRDM8Q9NQV8 689 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 NXF1Q9UBU9 619 aaKnown RBP11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 SNCAIPQ9Y6H5 919 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
SEMA4B-204ENST00000558065 CLUHO75153 1309 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 APOL1O14791 398 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 TLR3O15455 904 aaKnown RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 MAN1A1P33908 653 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 SERPINB5P36952 375 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 SEMA3AQ14563 771 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PRKD1Q15139 912 aaPredicted RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 C21orf62-AS1Q17RA5 79 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 FAM83BQ5T0W9 1011 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CCDC137Q6PK04 289 aaKnown RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 THNSL1Q8IYQ7 743 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 SLC9A6Q92581 669 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 SLC10A4Q96EP9 437 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 APOPT1Q96IL0 206 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 DBNDD2Q9BQY9 259 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 TMEM121Q9BTD3 319 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 MANSC1Q9H8J5 431 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CABP5Q9NP86 173 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 HOMER2Q9NSB8 354 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 DNAJC28Q9NX36 388 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 SFMBT1Q9UHJ3 866 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 TP53BP1Q12888 1972 aaPredicted RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CYP3A7-CYP3A51PA0A087WV96 503 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 HMX3A6NHT5 357 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 ECDO95905 644 aaPredicted RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PDGFAP04085 211 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 MCF2P10911 925 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 SPNP16150 400 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PTPN1P18031 435 aaKnown RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CYP3A7P24462 503 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 MCAMP43121 646 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 ARFIP1P53367 373 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 MAPK10P53779 464 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 RAD23AP54725 363 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 ERAP2Q6P179 960 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PLEKHM3Q6ZWE6 761 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 DAGLBQ8NCG7 672 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 IL17REQ8NFR9 667 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 OR4M2Q8NGB6 313 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 ZFP90Q8TF47 636 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PDCD6IPQ8WUM4 868 aaKnown RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PLIN2Q99541 437 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CDADC1Q9BWV3 514 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.25□□□□□ -0.619e-8■■■□□ 17.1
SEMA4B-204ENST00000558065 OR51B5Q9H339 312 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 VRTNQ9H8Y1 702 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PTBP2Q9UKA9 531 aaKnown RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 PRR12Q9ULL5 1215 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 NENFQ9UMX5 172 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CPS1P31327 1500 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 BTN3A1O00481 513 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 ZBTB43O43298 467 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 TOP3AQ13472 1001 aaPredicted RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 STAT4Q14765 748 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms