RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 ZZEF1O43149 2961 aa14.04□□□□□ -0.16
SNRPA1-204ENST00000558020 SYNJ2BP-COX16A0A087WUM0 186 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 A0A1W2PP55 124 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 BECN2A8MW95 431 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 TNFSF14O43557 240 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 IL1BP01584 269 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 IGHV4-34P06331 123 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 CTSOP43234 321 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 NME3Q13232 169 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 EIF4EBP2Q13542 120 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 TAF5Q15542 800 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 ACCSLQ4AC99 568 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 ACBD5Q5T8D3 534 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 OR6B2Q6IFH4 312 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 GJB7Q6PEY0 223 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 CCNI2Q6ZMN8 369 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 SLCO6A1Q86UG4 719 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 GALNT15Q8N3T1 639 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 WDTC1Q8N5D0 677 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 C1orf131Q8NDD1 294 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 OR14C36Q8NHC7 312 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 RPRD1AQ96P16 312 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 SLC2A13Q96QE2 648 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 SPAG5Q96R06 1193 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 CPXM1Q96SM3 734 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 FAM129BQ96TA1 746 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 PRMT1Q99873 361 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 KDM4CQ9H3R0 1056 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 AASDHPPTQ9NRN7 309 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 COX16Q9P0S2 106 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 DACH1Q9UI36 760 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 SLC25A13Q9UJS0 675 aa14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-204ENST00000558020 ASPMQ8IZT6 3477 aa14.02□□□□□ -0.16
SNRPA1-204ENST00000558020 KNL1Q8NG31 2342 aa14.02□□□□□ -0.16
SNRPA1-204ENST00000558020 NUMA1Q14980 2115 aa14.02□□□□□ -0.16
SNRPA1-204ENST00000558020 TBC1D3DA0A087WVF3 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3IA0A087WXS9 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3EA0A087X179 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3KA0A087X1G2 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3FA6NER0 549 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3LB9A6J9 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 CLDN11O75508 207 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 F9P00740 461 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3HP0C7X1 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 PDGFRAP16234 1089 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 ZNF18P17022 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 CD38P28907 300 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 NOS2P35228 1153 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 NUDT1P36639 197 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 CTSKP43235 329 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 PSMD8P48556 350 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 SLC6A3Q01959 620 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 CCDC15Q0P6D6 951 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 AUHQ13825 339 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 MAN2A1Q16706 1144 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3GQ6DHY5 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3CQ6IPX1 549 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 FBXL22Q6P050 247 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 PASD1Q8IV76 773 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 TBC1D3Q8IZP1 549 aaPredicted RBP14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 STK40Q8N2I9 435 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 OR8D1Q8WZ84 308 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 PTPRN2Q92932 1015 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 FEM1AQ9BSK4 669 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 DNAJC12Q9UKB3 198 aa14.02□□□□□ -0.17
SNRPA1-204ENST00000558020 MUC22E2RYF6 1773 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 DMXL2Q8TDJ6 3036 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 H0Y8X5 98 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 M0QYT0 321 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 FOXN3O00409 490 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 KCNK3O14649 394 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 YKT6O15498 198 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 SLC7A4O43246 635 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 GRAP2O75791 330 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 ATXN1LP0C7T5 689 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 CDK4P11802 303 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 ARRB1P49407 418 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 KRT83P78385 493 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 SCAPQ12770 1279 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 LRRC31Q6UY01 552 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 SLC26A9Q7LBE3 791 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 PRPF39Q86UA1 669 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 IRF2BP1Q8IU81 584 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 TMEM35BQ8NCS4 154 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 BAHD1Q8TBE0 780 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 SERAC1Q96JX3 654 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 ELF4Q99607 663 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 NDST4Q9H3R1 872 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 CCDC86Q9H6F5 360 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 WDCPQ9H6R7 721 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 GDF3Q9NR23 364 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 SERGEFQ9UGK8 458 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 VPS28Q9UK41 221 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 VANGL2Q9ULK5 521 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 STAP1Q9ULZ2 295 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 SLCO1B1Q9Y6L6 691 aa14.01□□□□□ -0.17
SNRPA1-204ENST00000558020 FAM208BQ5VWN6 2430 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms