RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 HNRNPLP14866 589 aaKnown RBP eCLIP14.73□□□□□ -0.055e-6■□□□□ 8.4
USP3-205ENST00000557884 RHOQP17081 205 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 COL9A1P20849 921 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 IL12RB1P42701 662 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 TAS2R40P59535 323 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 TPI1P60174 286 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 DMWDQ09019 674 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 TCF15Q12870 199 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 ZNF234Q14588 700 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 EOGTQ5NDL2 527 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 HEATR6Q6AI08 1181 aaKnown RBP14.73□□□□□ -0.05
USP3-205ENST00000557884 SDE2Q6IQ49 451 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 TMEM92Q6UXU6 159 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 NLRP14Q86W24 1093 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 ZNF366Q8N895 744 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 OR7D4Q8NG98 312 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 TTC17Q96AE7 1141 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 FEM1AQ9BSK4 669 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.73□□□□□ -0.05
USP3-205ENST00000557884 NDFIP2Q9NV92 336 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 KLHL11Q9NVR0 708 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 DNAI1Q9UI46 699 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 VPS28Q9UK41 221 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 PLA2G4CQ9UP65 541 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 HYOU1Q9Y4L1 999 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 STON1Q9Y6Q2 735 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 KMT2EQ8IZD2 1858 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 KIAA1549LQ6ZVL6 1849 aa14.73□□□□□ -0.05
USP3-205ENST00000557884 A0A0D9SEW6 157 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 A0A0U1RQJ8 604 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 EEF2KO00418 725 aaKnown RBP14.72□□□□□ -0.05
USP3-205ENST00000557884 DAPK3O43293 454 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 SP9P0CG40 484 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 TDGF1P13385 188 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 GOT1P17174 413 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 PRKCHP24723 683 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 MAN1A1P33908 653 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 STK19P49842 368 aaPredicted RBP14.72□□□□□ -0.05
USP3-205ENST00000557884 OXCT1P55809 520 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 SLC12A1Q13621 1099 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 TCEAL1Q15170 157 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 HADHQ16836 314 aaKnown RBP14.72□□□□□ -0.05
USP3-205ENST00000557884 PTPRNQ16849 979 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 HSF5Q4G112 596 aaPredicted RBP14.72□□□□□ -0.05
USP3-205ENST00000557884 BOLA3Q53S33 107 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 C6orf118Q5T5N4 469 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 SERPINA13PQ6UXR4 307 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 MAMSTRQ6ZN01 415 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 SETD3Q86TU7 594 aaPredicted RBP14.72□□□□□ -0.05
USP3-205ENST00000557884 TSTD1Q8NFU3 115 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 ATRIPQ8WXE1 791 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 ALG14Q96F25 216 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 PRRX2Q99811 253 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 SPON2Q9BUD6 331 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 LACRTQ9GZZ8 138 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 GOLPH3Q9H4A6 298 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 TMEM248Q9NWD8 314 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 LCMT1Q9UIC8 334 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 FBXO4Q9UKT5 387 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 OR51B4Q9Y5P0 310 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 DUSP10Q9Y6W6 482 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 MIA3Q5JRA6 1907 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 MUC6Q6W4X9 2439 aa14.72□□□□□ -0.05
USP3-205ENST00000557884 TCRBV21S2A2A0A5A6 115 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 ILVBLA1L0T0 632 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 BUB1O43683 1085 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 BUB1BO60566 1050 aaPredicted RBP14.71□□□□□ -0.05
USP3-205ENST00000557884 SNAP91O60641 907 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 PAPSS2O95340 614 aaPredicted RBP14.71□□□□□ -0.05
USP3-205ENST00000557884 APBB3O95704 486 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 TNNT1P13805 278 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 ACVRL1P37023 503 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 ARHGAP25P42331 645 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 MAPKAPK2P49137 400 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 FNTBP49356 437 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 VAV2P52735 878 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 NAP1L1P55209 391 aaKnown RBP14.71□□□□□ -0.05
USP3-205ENST00000557884 KRT83P78385 493 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 ECT2LQ008S8 904 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 KRT81Q14533 505 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 CRY1Q16526 586 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 ATP13A4Q4VNC1 1196 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 ZFYVE27Q5T4F4 411 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 KIAA1211LQ6NV74 962 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 RFX8Q6ZV50 586 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 PSTKQ8IV42 348 aaKnown RBP14.71□□□□□ -0.05
USP3-205ENST00000557884 LRRC8AQ8IWT6 810 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 RTL3Q8N8U3 475 aaKnown RBP14.71□□□□□ -0.05
USP3-205ENST00000557884 CCDC112Q8NEF3 446 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 TEKT4Q8WW24 435 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 ANP32BQ92688 251 aaKnown RBP14.71□□□□□ -0.05
USP3-205ENST00000557884 RPL10LQ96L21 214 aaKnown RBP14.71□□□□□ -0.05
USP3-205ENST00000557884 MRGPRX3Q96LB0 322 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 PSMB7Q99436 277 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 GABRG3Q99928 467 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 MTG2Q9H4K7 406 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 CATSPERBQ9H7T0 1116 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 FAM86C1Q9NVL1 165 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 CWC15Q9P013 229 aaKnown RBP14.71□□□□□ -0.05
USP3-205ENST00000557884 SALL4Q9UJQ4 1053 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms