RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 NTMQ9P121 344 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 KLQ9UEF7 1012 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 EIF2B4Q9UI10 523 aaKnown RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 MOSPD1Q9UJG1 213 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 SSX2IPQ9Y2D8 614 aa4.02□□□□□ -1.77
TDP1-217ENST00000557782 COPG1Q9Y678 874 aaKnown RBP4.02□□□□□ -1.77
TDP1-217ENST00000557782 AOX1Q06278 1338 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 CYP3A7-CYP3A51PA0A087WV96 503 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 CCDC187A0A096LP49 1063 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PRAMEF33A0A0G2JMD5 474 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 C9orf118A6NHY6 69 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 NPIPB13A6NJU9 1138 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 NPIPB5A8MRT5 1133 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 CDRT15L2A8MXV6 281 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 GOLGA6L6A8MZA4 724 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 NPIPB4C9JG80 1138 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 M0QZQ0 153 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 DDX39AO00148 427 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 CPLX1O14810 134 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 STX6O43752 255 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 HBP1O60381 514 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 SYNCRIPO60506 623 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 PRAMEF10O60809 474 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PAGE4O60829 102 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 CHRM4P08173 479 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PRR35P0CG20 571 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PEPDP12955 493 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 FDPSP14324 419 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 HLA-DPA1P20036 260 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 SPINK2P20155 84 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 CPT2P23786 658 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 CYP3A7P24462 503 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 TLX1P31314 330 aaPredicted RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 MCM7P33993 719 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 TCF7P36402 384 aaPredicted RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 IGHMBP2P38935 993 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 TXKP42681 527 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 MFAP4P55083 255 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ABHD18Q0P651 414 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 CSTF3Q12996 717 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 CAMK2DQ13557 499 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 FRG1Q14331 258 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 HLXQ14774 488 aaPredicted RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 C5orf22Q49AR2 442 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 GXYLT1Q4G148 440 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ZNF628Q5EBL2 1059 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ZNF648Q5T619 568 aaPredicted RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 UBAP2Q5T6F2 1119 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 TATDN1Q6P1N9 297 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ACSM6Q6P461 480 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ALKBH5Q6P6C2 394 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 GJB7Q6PEY0 223 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 CPLX2Q6PUV4 134 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 MICALCLQ6ZW33 695 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 BTN2A1Q7KYR7 527 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PLPPR4Q7Z2D5 763 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 TMPRSS9Q7Z410 1059 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PRRT2Q7Z6L0 340 aaPredicted RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 LCA5Q86VQ0 697 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ZNF808Q8N4W9 903 aaPredicted RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 C10orf53Q8N6V4 93 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PLD5Q8N7P1 536 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ENDOVQ8N8Q3 282 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 ZBTB8BQ8NAP8 495 aaPredicted RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 OR52N2Q8NGI0 321 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 KIF18AQ8NI77 898 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ZNF483Q8TF39 744 aaPredicted RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 GRK7Q8WTQ7 553 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 GLMPQ8WWB7 406 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 ATG4AQ8WYN0 398 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 FAM136AQ96C01 138 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 TRMT61AQ96FX7 289 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 C1orf74Q96LT6 269 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 WDFY2Q96P53 400 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 FIZ1Q96SL8 496 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 GCM1Q9NP62 436 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PDRG1Q9NUG6 133 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 HSFX1Q9UBD0 423 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PEMTQ9UBM1 199 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 SLC25A13Q9UJS0 675 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 BTBD3Q9Y2F9 522 aa4.01□□□□□ -1.77
TDP1-217ENST00000557782 PTRH2Q9Y3E5 179 aaKnown RBP4.01□□□□□ -1.77
TDP1-217ENST00000557782 ADGRF5Q8IZF2 1346 aa4□□□□□ -1.77
TDP1-217ENST00000557782 LOC100509620A0A075B734 347 aa4□□□□□ -1.77
TDP1-217ENST00000557782 A0A0U1RQK1 487 aa4□□□□□ -1.77
TDP1-217ENST00000557782 TEX51A0A1B0GUA7 166 aa4□□□□□ -1.77
TDP1-217ENST00000557782 A0A1W2PS29 197 aa4□□□□□ -1.77
TDP1-217ENST00000557782 TRBC2A0A5B9 178 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ZNF320A2RRD8 509 aa4□□□□□ -1.77
TDP1-217ENST00000557782 ZAR1LA6NP61 321 aa4□□□□□ -1.77
TDP1-217ENST00000557782 BTBD18B2RXH4 712 aa4□□□□□ -1.77
TDP1-217ENST00000557782 H0YAE9 185 aa4□□□□□ -1.77
TDP1-217ENST00000557782 IPO8O15397 1037 aaKnown RBP4□□□□□ -1.77
TDP1-217ENST00000557782 CEP104O60308 925 aa4□□□□□ -1.77
TDP1-217ENST00000557782 FMO6PO60774 539 aa4□□□□□ -1.77
TDP1-217ENST00000557782 B3GALNT1O75752 331 aa4□□□□□ -1.77
TDP1-217ENST00000557782 IPO7O95373 1038 aaKnown RBP4□□□□□ -1.77
TDP1-217ENST00000557782 GPANK1O95872 356 aa4□□□□□ -1.77
TDP1-217ENST00000557782 PLA2G1BP04054 148 aaKnown RBP4□□□□□ -1.77
TDP1-217ENST00000557782 GALTP07902 379 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms