RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ZNF217O75362 1048 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 RHOBTB1O94844 696 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 ADCY5O95622 1261 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 GYPCP04921 128 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 EPHX1P07099 455 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 RHOCP08134 193 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 DLDP09622 509 aaKnown RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 RRM1P23921 792 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 HLA-FP30511 346 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 RFC1P35251 1148 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 MRE11P49959 708 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF143P52747 638 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 AIF1P55008 147 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 KRT83P78385 493 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 EIF4EBP2Q13542 120 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF234Q14588 700 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 CCDC14Q49A88 953 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 CCDC122Q5T0U0 273 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 RWDD4Q6NW29 188 aaKnown RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 SARM1Q6SZW1 724 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 KIAA1324Q6UXG2 1013 aaKnown RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 TMC6Q7Z403 805 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 SLFN11Q7Z7L1 901 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 ALYREFQ86V81 257 aaKnown RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 CCAR2Q8N163 923 aaKnown RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 JOSD2Q8TAC2 188 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 GAB3Q8WWW8 586 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 CCDC42Q96M95 316 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 PRICKLE1Q96MT3 831 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 CNPY3Q9BT09 278 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 ZYG11BQ9C0D3 744 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 MUC3BQ9H195 1237 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 FBRSQ9HAH7 460 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 ZDHHC4Q9NPG8 344 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 CACNA2D2Q9NY47 1150 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 EBF1Q9UH73 591 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 XPO7Q9UIA9 1087 aaKnown RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 VPS28Q9UK41 221 aa8.58□□□□□ -1.04
PSEN1-223ENST00000557511 SMG5Q9UPR3 1016 aaKnown RBP8.58□□□□□ -1.04
PSEN1-223ENST00000557511 E9PAM4 449 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 DDX3XO00571 662 aaKnown RBP eCLIP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 DAPK3O43293 454 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 CCP110O43303 1012 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 LILRB5O75023 590 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 ENDOD1O94919 500 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 GJB6O95452 261 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 SRPRAP08240 638 aaKnown RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 OR1E1P30953 314 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 CD70P32970 193 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 ADRA1BP35368 520 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 ETFBP38117 255 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 SGSHP51688 502 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 ECT2LQ008S8 904 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 MESP2Q0VG99 397 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 LMAN2Q12907 356 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 PTP4A2Q12974 167 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 C15orf59Q2T9L4 293 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 PLEKHG6Q3KR16 790 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 PITRM1Q5JRX3 1037 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 LAIR1Q6GTX8 287 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 PLEKHA7Q6IQ23 1121 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 ALKBH5Q6P6C2 394 aaKnown RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 SLC36A4Q6YBV0 504 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 SFTPA1Q8IWL2 248 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 CTNNBL1Q8WYA6 563 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 RUBCNQ92622 972 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 PRCCQ92733 491 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 NELL1Q92832 810 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 TBC1D31Q96DN5 1066 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 CCDC114Q96M63 670 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 PRMT1Q99873 361 aaKnown RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 GABRG3Q99928 467 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 C2orf49Q9BVC5 232 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 TPSD1Q9BZJ3 242 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 EPC1Q9H2F5 836 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 RETREG1Q9H6L5 497 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 LUC7LQ9NQ29 371 aaKnown RBP8.57□□□□□ -1.04
PSEN1-223ENST00000557511 TAS2R14Q9NYV8 317 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 LCMT1Q9UIC8 334 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 CLEC4EQ9ULY5 219 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF318Q5VUA4 2279 aa8.57□□□□□ -1.04
PSEN1-223ENST00000557511 SSU72P8A0A1W2PR75 194 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 PRR23AA6NEV1 266 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 EIF3CLB5ME19 914 aaKnown RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 PRPSAP2O60256 369 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 ADAM23O75077 832 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 MFAP3LO75121 409 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 NDUFS2O75306 463 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 IPO7O95373 1038 aaKnown RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 PLEKP08567 350 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 TDGF1P13385 188 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 TFE3P19532 575 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 EIF4A3P38919 411 aaKnown RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 CSKP41240 450 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 DPP6P42658 865 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 IL12RB1P42701 662 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 SSR1P43307 286 aaKnown RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 ATXN1P54253 815 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms