RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 SMIM22K7EJ46 135 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 DHX16O60231 1041 aaKnown RBP5.11□□□□□ -1.59
PRPF39-212ENST00000557477 RAMP2O60895 175 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 RFPL3SP0C7P2 107 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 ELF1P32519 619 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 IDUAP35475 653 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 PTH2RP49190 550 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 GEMIN4P57678 1058 aaKnown RBP5.11□□□□□ -1.59
PRPF39-212ENST00000557477 GALNT2Q10471 571 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 RUNDC3AQ59EK9 446 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 CC2D1BQ5T0F9 858 aaKnown RBP5.11□□□□□ -1.59
PRPF39-212ENST00000557477 TMEM88Q6PEY1 159 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 VSTM1Q6UX27 236 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 TFAP2DQ7Z6R9 452 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.11□□□□□ -1.59
PRPF39-212ENST00000557477 MRGPRGQ86SM5 289 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 RFX6Q8HWS3 928 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 GALNT4Q8N4A0 578 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 AMER2Q8N7J2 671 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 CAGE1Q8TC20 777 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 ST8SIA4Q92187 359 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 SKA1Q96BD8 255 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 MASTLQ96GX5 879 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 RITA1Q96K30 269 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 PPP1R10Q96QC0 940 aaKnown RBP5.11□□□□□ -1.59
PRPF39-212ENST00000557477 SLC22A11Q9NSA0 550 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 THAP1Q9NVV9 213 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 KLQ9UEF7 1012 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 ARHGAP26Q9UNA1 814 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 GDAQ9Y2T3 454 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 SIRT4Q9Y6E7 314 aaPredicted RBP5.11□□□□□ -1.59
PRPF39-212ENST00000557477 ZNF518AQ6AHZ1 1483 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 ARHGEF12Q9NZN5 1544 aa5.11□□□□□ -1.59
PRPF39-212ENST00000557477 BTBD19C9JJ37 291 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 TBX18O95935 607 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 GPD1P21695 349 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SOX10P56693 466 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 TDGQ13569 410 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 FHL2Q14192 279 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SEC23BQ15437 767 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 MAPRE1Q15691 268 aaKnown RBP5.1□□□□□ -1.59
PRPF39-212ENST00000557477 TMEM63BQ5T3F8 832 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 LIPMQ5VYY2 423 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 DENND1BQ6P3S1 775 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 RTL10Q7L3V2 364 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 RSRC2Q7L4I2 434 aaKnown RBP5.1□□□□□ -1.59
PRPF39-212ENST00000557477 ARHGEF25Q86VW2 580 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 CHSY1Q86X52 802 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SCN4BQ8IWT1 228 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 VPS52Q8N1B4 723 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 TCP11L2Q8N4U5 519 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 ENDOVQ8N8Q3 282 aaKnown RBP5.1□□□□□ -1.59
PRPF39-212ENST00000557477 EXD3Q8N9H8 876 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 ADAMTS18Q8TE60 1221 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 CELF1Q92879 486 aaKnown RBP5.1□□□□□ -1.59
PRPF39-212ENST00000557477 ATP2A3Q93084 1043 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 ZBTB10Q96DT7 871 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 RNFT2Q96EX2 444 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SENP7Q9BQF6 1050 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 ANP32EQ9BTT0 268 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 ABHD14AQ9BUJ0 271 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 GATA5Q9BWX5 397 aaPredicted RBP5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SIGLEC1Q9BZZ2 1709 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 CTDSP1Q9GZU7 261 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SCAND2PQ9GZW5 306 aaPredicted RBP5.1□□□□□ -1.59
PRPF39-212ENST00000557477 PAIP1Q9H074 479 aaKnown RBP5.1□□□□□ -1.59
PRPF39-212ENST00000557477 NUAK2Q9H093 628 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 ACAD9Q9H845 621 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SYNPO2LQ9H987 977 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SFXN1Q9H9B4 322 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 SMC4Q9NTJ3 1288 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 TBX20Q9UMR3 447 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 WNT6Q9Y6F9 365 aa5.1□□□□□ -1.59
PRPF39-212ENST00000557477 CCDC196A0A1B0GTZ2 297 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 POC1B-GALNT4F8VUJ3 575 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 RRHO14718 337 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 ANP32CO43423 234 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 C1QL1O75973 258 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 WEE2P0C1S8 567 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 ARSAP15289 507 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 KRT9P35527 623 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 PGM1P36871 562 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 ACVRL1P37023 503 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 CLK3P49761 638 aaKnown RBP5.09□□□□□ -1.59
PRPF39-212ENST00000557477 MVDP53602 400 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 ALKBH1Q13686 389 aaKnown RBP5.09□□□□□ -1.59
PRPF39-212ENST00000557477 GXYLT1Q4G148 440 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 FAM180BQ6P0A1 224 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 MTFR2Q6P444 385 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 RANBP10Q6VN20 620 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 RNF144BQ7Z419 303 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 MDGA2Q7Z553 956 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 LSM14AQ8ND56 463 aaKnown RBP5.09□□□□□ -1.59
PRPF39-212ENST00000557477 ADPRHL1Q8NDY3 354 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 TBC1D22AQ8WUA7 517 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 ZUFSPQ96AP4 578 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 TRIM31Q9BZY9 425 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 TRIM2Q9C040 744 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 UNC45AQ9H3U1 944 aa5.09□□□□□ -1.59
PRPF39-212ENST00000557477 PRDM13Q9H4Q3 707 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms